Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HOXD4P09016 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD4P09016 OR9K1P-201ENST00000326513 941 ntBASIC5.25□□□□□ -1.57
HOXD4P09016 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD4P09016 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD4P09016 AL355433.1-201ENST00000422804 300 ntBASIC5.25□□□□□ -1.57
HOXD4P09016 AC016027.5-201ENST00000427227 210 ntBASIC5.25□□□□□ -1.57
HOXD4P09016 Z84478.1-201ENST00000438230 1219 ntBASIC5.25□□□□□ -1.57
HOXD4P09016 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXD4P09016 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXD4P09016 SDC4P-201ENST00000453285 601 ntBASIC5.25□□□□□ -1.57
HOXD4P09016 AC109481.1-201ENST00000509173 282 ntBASIC5.25□□□□□ -1.57
HOXD4P09016 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXD4P09016 AC074087.1-201ENST00000512059 724 ntBASIC5.25□□□□□ -1.57
HOXD4P09016 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXD4P09016 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXD4P09016 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXD4P09016 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXD4P09016 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD4P09016 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXD4P09016 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD4P09016 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HOXD4P09016 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD4P09016 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD4P09016 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD4P09016 AP001029.2-203ENST00000589795 4910 ntBASIC5.25□□□□□ -1.57
HOXD4P09016 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD4P09016 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HOXD4P09016 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
HOXD4P09016 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
HOXD4P09016 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD4P09016 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD4P09016 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXD4P09016 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXD4P09016 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXD4P09016 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HOXD4P09016 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXD4P09016 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 MTCO1P7-201ENST00000419523 1542 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 AC053481.2-202ENST00000582394 1500 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXD4P09016 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXD4P09016 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXD4P09016 RNA5SP500-201ENST00000364486 119 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXD4P09016 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 AL358178.1-201ENST00000407698 397 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXD4P09016 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.24□□□□□ -1.57
HOXD4P09016 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 AC023141.8-201ENST00000442554 208 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXD4P09016 AC073909.1-201ENST00000447112 999 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXD4P09016 RNU1-88P-201ENST00000459274 128 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 PFN1P6-201ENST00000476786 399 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 AC008410.1-201ENST00000483777 339 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 AC105420.1-201ENST00000504389 582 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXD4P09016 RNA5SP230-201ENST00000517039 122 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXD4P09016 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXD4P09016 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.24□□□□□ -1.57
HOXD4P09016 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXD4P09016 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXD4P09016 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 AC027334.1-201ENST00000603257 310 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 AC020658.4-201ENST00000613987 684 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXD4P09016 MIR6730-201ENST00000622213 67 ntBASIC5.24□□□□□ -1.57
HOXD4P09016 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXD4P09016 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
HOXD4P09016 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXD4P09016 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD4P09016 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD4P09016 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.23□□□□□ -1.57
HOXD4P09016 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HOXD4P09016 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD4P09016 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD4P09016 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD4P09016 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD4P09016 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HOXD4P09016 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD4P09016 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD4P09016 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms