Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RNF40O75150 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.41□□□□□ -1.06
RNF40O75150 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 AC074198.1-201ENST00000506546 1397 ntBASIC8.41□□□□□ -1.06
RNF40O75150 EEF1A1P42-201ENST00000613436 1331 ntBASIC8.41□□□□□ -1.06
RNF40O75150 RNU5D-1-201ENST00000363299 116 ntBASIC8.41□□□□□ -1.06
RNF40O75150 RNU6-1309P-201ENST00000363305 108 ntBASIC8.41□□□□□ -1.06
RNF40O75150 COQ3-202ENST00000369240 646 ntTSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 SSX9-201ENST00000376909 591 ntBASIC8.41□□□□□ -1.06
RNF40O75150 MSRB1P1-201ENST00000396851 354 ntBASIC8.41□□□□□ -1.06
RNF40O75150 AL451061.1-201ENST00000407887 862 ntBASIC8.41□□□□□ -1.06
RNF40O75150 RN7SKP32-201ENST00000410167 303 ntBASIC8.41□□□□□ -1.06
RNF40O75150 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.41□□□□□ -1.06
RNF40O75150 SEPT7P5-201ENST00000434048 306 ntBASIC8.41□□□□□ -1.06
RNF40O75150 AC009961.2-201ENST00000435771 251 ntBASIC8.41□□□□□ -1.06
RNF40O75150 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.41□□□□□ -1.06
RNF40O75150 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 HMGN2P25-201ENST00000486956 268 ntBASIC8.41□□□□□ -1.06
RNF40O75150 RN7SL37P-201ENST00000490461 307 ntBASIC8.41□□□□□ -1.06
RNF40O75150 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 UGT2A3P7-201ENST00000510485 734 ntBASIC8.41□□□□□ -1.06
RNF40O75150 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 PTK2-241ENST00000522950 548 ntTSL 4 BASIC8.41□□□□□ -1.06
RNF40O75150 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC8.41□□□□□ -1.06
RNF40O75150 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.41□□□□□ -1.06
RNF40O75150 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 RBM22P12-201ENST00000567098 1255 ntBASIC8.41□□□□□ -1.06
RNF40O75150 MIR3149-201ENST00000584629 83 ntBASIC8.41□□□□□ -1.06
RNF40O75150 AC009977.1-201ENST00000586015 570 ntBASIC8.41□□□□□ -1.06
RNF40O75150 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.41□□□□□ -1.06
RNF40O75150 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 AL109918.3-201ENST00000603072 338 ntBASIC8.41□□□□□ -1.06
RNF40O75150 AC112191.3-201ENST00000604371 277 ntBASIC8.41□□□□□ -1.06
RNF40O75150 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC8.41□□□□□ -1.06
RNF40O75150 AC104010.1-201ENST00000616889 150 ntBASIC8.41□□□□□ -1.06
RNF40O75150 AC139792.3-201ENST00000623525 224 ntBASIC8.41□□□□□ -1.06
RNF40O75150 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 AC092111.1-201ENST00000618256 3358 ntBASIC8.41□□□□□ -1.06
RNF40O75150 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 AC010680.2-201ENST00000603521 2117 ntBASIC8.41□□□□□ -1.06
RNF40O75150 OR6M2P-202ENST00000641780 2063 ntBASIC8.41□□□□□ -1.06
RNF40O75150 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RNF40O75150 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
RNF40O75150 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
RNF40O75150 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
RNF40O75150 AC011447.7-201ENST00000624228 1590 ntBASIC8.4□□□□□ -1.06
RNF40O75150 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 GOT2P1-201ENST00000440922 1309 ntBASIC8.4□□□□□ -1.06
RNF40O75150 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.4□□□□□ -1.06
RNF40O75150 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms