Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ARID3CA6NKF2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC9.5□□□□□ -0.89
ARID3CA6NKF2 SUMO2P15-201ENST00000604285 278 ntBASIC9.5□□□□□ -0.89
ARID3CA6NKF2 AC141002.1-201ENST00000607025 279 ntBASIC9.5□□□□□ -0.89
ARID3CA6NKF2 CU459211.1-201ENST00000635667 749 ntBASIC9.5□□□□□ -0.89
ARID3CA6NKF2 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ARID3CA6NKF2 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
ARID3CA6NKF2 NBPF8-201ENST00000583271 5330 ntBASIC9.5□□□□□ -0.89
ARID3CA6NKF2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ARID3CA6NKF2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
ARID3CA6NKF2 FBXL21-201ENST00000297158 1305 ntBASIC9.5□□□□□ -0.89
ARID3CA6NKF2 AC123769.1-201ENST00000530992 3192 ntBASIC9.5□□□□□ -0.89
ARID3CA6NKF2 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ARID3CA6NKF2 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
ARID3CA6NKF2 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC9.5□□□□□ -0.89
ARID3CA6NKF2 FO082842.1-201ENST00000423552 1370 ntBASIC9.5□□□□□ -0.89
ARID3CA6NKF2 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 MAPK10-365ENST00000641902 3825 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 AC012254.3-201ENST00000591183 2117 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 PARP4P2-201ENST00000446672 3326 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 SELENOWP1-201ENST00000322792 252 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 U3.7-201ENST00000363668 216 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 AC119751.3-201ENST00000399720 670 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 RN7SKP59-201ENST00000410520 314 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 RPL35AP24-201ENST00000413846 330 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 DEFB130D-201ENST00000426866 237 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 GTF2IP11-201ENST00000526931 420 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 AC118658.2-201ENST00000618697 459 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 AL035461.2-201ENST00000619201 524 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 TSHZ2-205ENST00000626626 670 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 TNPO1P2-201ENST00000426249 2665 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
ARID3CA6NKF2 AC079298.1-201ENST00000625026 1619 ntBASIC9.49□□□□□ -0.89
ARID3CA6NKF2 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 MTHFD2P5-201ENST00000320415 844 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 RNU1-19P-201ENST00000363306 165 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 RNU6-481P-201ENST00000384194 107 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 MIR433-201ENST00000384837 93 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 RNU6-796P-201ENST00000391086 107 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 MRPL53P1-201ENST00000414323 319 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC005005.2-201ENST00000420779 380 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC008753.1-201ENST00000423096 284 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 MTND5P25-201ENST00000430499 799 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC091390.2-201ENST00000432573 374 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC138409.2-202ENST00000507274 458 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC133963.2-201ENST00000513686 578 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 MTCO2P22-201ENST00000603246 681 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC114878.2-201ENST00000604863 1251 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AL136131.3-201ENST00000607600 188 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC084782.3-201ENST00000612282 578 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AC079395.3-201ENST00000615161 484 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 AL355493.4-201ENST00000618530 292 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC9.48□□□□□ -0.89
ARID3CA6NKF2 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ARID3CA6NKF2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms