Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
PDZRN3Q9UPQ7 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
PDZRN3Q9UPQ7 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
PDZRN3Q9UPQ7 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 CCT4P2-201ENST00000233836 1548 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 FGG-201ENST00000336098 1659 ntTSL 2 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AL645937.1-201ENST00000641739 1652 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 SNORD115-48-201ENST00000364764 76 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AC026310.1-201ENST00000396004 378 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 VN1R12P-201ENST00000403778 876 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AL512430.2-201ENST00000406786 339 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AL158050.1-201ENST00000416077 457 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AC006509.1-201ENST00000420788 634 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 BTF3P10-201ENST00000433415 495 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 MTCYBP6-201ENST00000441810 138 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 RN7SL492P-201ENST00000460700 295 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 RN7SL83P-201ENST00000468131 297 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AC069439.1-201ENST00000494739 167 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AC110792.2-201ENST00000510278 224 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 RNA5SP473-201ENST00000516402 125 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 RN7SKP233-201ENST00000517005 110 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AC013701.1-201ENST00000522657 465 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 OR5BK1P-201ENST00000550421 823 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 OR11H3P-201ENST00000554547 982 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 RN7SL366P-201ENST00000577957 292 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 MIR4637-201ENST00000582405 84 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AC104458.1-201ENST00000608243 463 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 AC183089.2-201ENST00000637931 916 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 MKI67P1-201ENST00000604297 1460 ntBASIC9.02□□□□□ -0.97
PDZRN3Q9UPQ7 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 LRRC37A9P-201ENST00000603850 5376 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 Y_RNA.216-201ENST00000364205 93 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 Y_RNA.472-201ENST00000384322 102 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 RPL17P50-201ENST00000396131 546 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 RPL31P1-201ENST00000398116 372 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AL353133.1-201ENST00000407695 401 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 METTL5-204ENST00000409340 472 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 SPATA20P1-201ENST00000423089 438 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AL353729.1-201ENST00000425044 720 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 USP9YP16-201ENST00000430287 407 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 MOB1AP1-201ENST00000430903 535 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 OFD1P10Y-201ENST00000434110 1433 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 OTX2P1-201ENST00000450956 354 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 USP9YP23-201ENST00000455085 407 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 PSMA6P2-201ENST00000457574 686 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 RPS10P20-201ENST00000494130 463 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 PFN2-213ENST00000494827 793 ntTSL 4 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AC093890.1-201ENST00000502554 540 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 PABPC1P1-201ENST00000506347 591 ntBASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms