| CNTN3 | Q9P232 | AL161757.5-202 | ENST00000556696 | 570 nt | TSL 3 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC118755.1-201 | ENST00000572923 | 195 nt | TSL 3 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ANKRD20A5P-203 | ENST00000580200 | 566 nt | TSL 5 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | DLGAP1-AS4-201 | ENST00000582054 | 757 nt | TSL 5 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC012593.1-213 | ENST00000587255 | 510 nt | TSL 5 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AP002884.5-201 | ENST00000595053 | 1132 nt | BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AL592221.1-201 | ENST00000605266 | 382 nt | BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC073218.2-202 | ENST00000605962 | 617 nt | TSL 5 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC004908.1-201 | ENST00000606572 | 541 nt | BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | CSNK1A1-210 | ENST00000606719 | 835 nt | TSL 2 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AP003481.1-202 | ENST00000608214 | 503 nt | TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AL451074.6-201 | ENST00000608512 | 729 nt | BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | LINC01515-217 | ENST00000620859 | 694 nt | TSL 5 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | OFCC1-218 | ENST00000622909 | 754 nt | APPRIS ALT2 TSL 5 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC005858.3-201 | ENST00000624756 | 589 nt | BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | SOX9-AS1-218 | ENST00000628742 | 733 nt | TSL 5 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | SAMMSON-209 | ENST00000641222 | 1100 nt | BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ADGRE1-202 | ENST00000312053 | 3128 nt | APPRIS P3 TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | OR10A2-202 | ENST00000641461 | 5390 nt | APPRIS P1 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | DEUP1-209 | ENST00000531792 | 1656 nt | TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | MAPK10-323 | ENST00000641493 | 3207 nt | BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ANK2-215 | ENST00000509550 | 3638 nt | TSL 2 BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | SLC41A2-201 | ENST00000258538 | 4449 nt | APPRIS P1 TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | NUP214-202 | ENST00000411637 | 7538 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | WDR48-201 | ENST00000302313 | 3707 nt | APPRIS P1 TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | FAM72A-201 | ENST00000341209 | 1774 nt | TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | FAM72B-201 | ENST00000355228 | 1773 nt | TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | LINC00861-201 | ENST00000500989 | 5330 nt | TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC092111.2-201 | ENST00000611627 | 1414 nt | BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ATP2B4-204 | ENST00000367218 | 8918 nt | TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | KIAA0100-203 | ENST00000544884 | 6856 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | CEACAM20-205 | ENST00000620096 | 1494 nt | TSL 1 (best) BASIC | 7.43 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC092821.3-202 | ENST00000641304 | 2767 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC005839.1-201 | ENST00000624148 | 3213 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | NUMB-217 | ENST00000555738 | 1553 nt | TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | NUMB-232 | ENST00000560335 | 1586 nt | TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ADH7-202 | ENST00000437033 | 2516 nt | APPRIS P1 TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | TTTY10-202 | ENST00000455084 | 1628 nt | TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | PLCZ1-206 | ENST00000538330 | 1612 nt | TSL 2 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | KCNJ1-205 | ENST00000392666 | 2621 nt | APPRIS P1 TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AL035665.1-201 | ENST00000428495 | 1669 nt | TSL 3 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AL133243.4-201 | ENST00000623116 | 3109 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | CDK19-203 | ENST00000413605 | 6007 nt | TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ZNF407-202 | ENST00000309902 | 5595 nt | TSL 2 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | MEIS1-209 | ENST00000488550 | 5111 nt | APPRIS ALT1 TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | MGST2-201 | ENST00000265498 | 801 nt | APPRIS P1 TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | RNU4-21P-201 | ENST00000362802 | 126 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | CD84-205 | ENST00000368051 | 965 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | PRR9-201 | ENST00000368744 | 1229 nt | APPRIS P1 TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | MYO3A-202 | ENST00000376301 | 727 nt | TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | TRBV6-7-201 | ENST00000390373 | 344 nt | APPRIS P1 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC026310.1-201 | ENST00000396004 | 378 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ERMN-202 | ENST00000409216 | 746 nt | TSL 4 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC003092.2-201 | ENST00000411946 | 446 nt | TSL 2 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC013472.2-201 | ENST00000416226 | 306 nt | TSL 3 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AL359382.1-201 | ENST00000417838 | 426 nt | TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC006509.1-201 | ENST00000420788 | 634 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | F10-AS1-201 | ENST00000424635 | 417 nt | TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | RPL21P43-201 | ENST00000425440 | 472 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ZNF863P-201 | ENST00000426746 | 417 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ALG13-AS1-201 | ENST00000430794 | 195 nt | TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AL596276.1-201 | ENST00000434465 | 418 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AL445465.1-204 | ENST00000440220 | 447 nt | TSL 3 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | LRTOMT-209 | ENST00000440313 | 253 nt | TSL 3 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | UBQLN1P1-207 | ENST00000441056 | 1169 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC097499.1-201 | ENST00000444277 | 208 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | OSBPL10-AS1-206 | ENST00000447181 | 575 nt | TSL 4 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | MTND6P5-201 | ENST00000448266 | 512 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC016722.1-201 | ENST00000453936 | 652 nt | TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AL606519.1-201 | ENST00000458146 | 580 nt | TSL 2 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | RPL5P13-201 | ENST00000462840 | 709 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC116337.2-201 | ENST00000477662 | 156 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC107398.1-201 | ENST00000486904 | 505 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | MRPS5P3-201 | ENST00000515577 | 166 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | TPT1-AS1-206 | ENST00000519454 | 709 nt | TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ASCL3-201 | ENST00000531618 | 633 nt | APPRIS P1 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC009729.1-201 | ENST00000548873 | 1133 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AL445363.1-202 | ENST00000553697 | 545 nt | TSL 3 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AL049870.4-201 | ENST00000555741 | 486 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | LINC00929-203 | ENST00000556213 | 713 nt | TSL 2 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC018767.3-201 | ENST00000564185 | 481 nt | TSL 3 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ROCK1P1-201 | ENST00000573767 | 549 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC044840.1-201 | ENST00000577641 | 472 nt | TSL 3 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ABBA01006766.1-201 | ENST00000584728 | 294 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AC011374.2-201 | ENST00000607135 | 526 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | IL21-202 | ENST00000611104 | 707 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | AL607023.1-201 | ENST00000620045 | 248 nt | BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | NOS1-206 | ENST00000618760 | 12283 nt | TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | MDGA2-203 | ENST00000426342 | 2871 nt | APPRIS P2 TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | NBPF19-206 | ENST00000621744 | 14425 nt | TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | ADH1B-201 | ENST00000305046 | 4072 nt | APPRIS P1 TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | MAGEB10-202 | ENST00000614159 | 1389 nt | APPRIS P1 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | VTA1-202 | ENST00000367630 | 7028 nt | APPRIS P1 TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | CDH19-203 | ENST00000540086 | 1963 nt | TSL 2 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | CYP4Z2P-202 | ENST00000505841 | 1436 nt | TSL 2 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | VDAC2-214 | ENST00000543351 | 1424 nt | APPRIS P1 TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | KCNMA1-266 | ENST00000639601 | 11920 nt | APPRIS ALT2 TSL 5 BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | LRRC37B-220 | ENST00000584368 | 2773 nt | TSL 1 (best) BASIC | 7.42 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | MAPK10-365 | ENST00000641902 | 3825 nt | BASIC | 7.41 | □□□□□ -1.22 | | |
| CNTN3 | Q9P232 | MLLT3-203 | ENST00000380338 | 6772 nt | APPRIS P3 TSL 1 (best) BASIC | 7.41 | □□□□□ -1.22 | | |