Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 Y_RNA.419-201ENST00000384041 102 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AC010385.1-201ENST00000412374 256 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 RPS7P8-201ENST00000418311 581 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AC231533.2-201ENST00000419045 978 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AL353729.1-201ENST00000425044 720 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 FMO7P-201ENST00000436045 768 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AC002542.1-201ENST00000440683 193 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AC022364.2-201ENST00000457963 554 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AP000797.1-201ENST00000478870 387 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 RPL23AP37-201ENST00000479658 549 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 RN7SL647P-201ENST00000485429 300 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 NPY6R-201ENST00000503807 1112 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AC010487.1-201ENST00000594408 1172 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 OR7A8P-201ENST00000595427 913 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 OR5AH1P-201ENST00000595968 283 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AP005137.2-201ENST00000609238 400 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AL022238.3-201ENST00000609279 443 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AC007792.1-201ENST00000623023 402 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 AC100810.3-201ENST00000633189 2240 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 VEZF1P1-201ENST00000423931 1541 ntBASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.52□□□□□ -1.21
LYSMD3Q7Z3D4 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC092111.1-201ENST00000618256 3358 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 DDX50P1-201ENST00000438163 2400 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 SSX6-201ENST00000376932 562 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 RNU6-738P-201ENST00000384531 106 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 MIR575-201ENST00000385013 94 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 USP9YP13-201ENST00000417797 480 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC023141.1-201ENST00000419418 379 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 GAPDHP73-201ENST00000423411 1007 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 CLUHP1-201ENST00000435012 1190 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 SULT1D1P-201ENST00000458020 882 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 RN7SL308P-201ENST00000464971 297 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 RN7SL228P-201ENST00000470060 303 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC015820.1-201ENST00000473882 321 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 ACTG1P13-201ENST00000486987 1043 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC026427.2-201ENST00000506228 536 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC112225.1-201ENST00000508230 297 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 Y_RNA.704-201ENST00000516851 102 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 RNU6-430P-201ENST00000517078 107 ntBASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC7.51□□□□□ -1.21
LYSMD3Q7Z3D4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms