Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VARS2Q5ST30 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
VARS2Q5ST30 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VARS2Q5ST30 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 Z83820.1-201ENST00000456978 1499 ntBASIC8.63□□□□□ -1.03
VARS2Q5ST30 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
VARS2Q5ST30 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 NACAP2-201ENST00000318548 624 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 RNU6-874P-201ENST00000362390 105 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 Y_RNA.396-201ENST00000383949 103 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 RNU6-1081P-201ENST00000384537 107 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 SAR1AP2-201ENST00000392696 594 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 RNU6-370P-201ENST00000411008 104 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 AC109638.1-201ENST00000417406 326 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 AC018865.2-201ENST00000423631 129 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 YWHAEP5-201ENST00000431545 765 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 AL132765.1-201ENST00000434165 553 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 DNAJC19P5-201ENST00000443295 316 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 ELOCP24-201ENST00000456370 334 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 EIF3LP2-201ENST00000457262 807 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 RN7SL815P-201ENST00000470970 290 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 AL928654.1-201ENST00000476081 354 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 RPL7AP26-201ENST00000488538 813 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 RNU6-138P-201ENST00000515952 107 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 AL121594.2-201ENST00000541658 472 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 GTF2IP8-201ENST00000560687 584 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 AC024614.2-201ENST00000577584 372 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 AC115621.1-201ENST00000604653 858 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 AL121612.2-201ENST00000612261 482 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 uc_338.15-201ENST00000615470 191 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 FTX_2.1-201ENST00000618816 94 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 AC093909.6-201ENST00000624757 775 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 DLST-216ENST00000626051 252 ntTSL 5 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 AC099654.6-201ENST00000636487 512 ntBASIC8.62□□□□□ -1.03
VARS2Q5ST30 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.62□□□□□ -1.03
VARS2Q5ST30 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
VARS2Q5ST30 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 MTND5P19-201ENST00000424872 1794 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC007126.1-201ENST00000508202 4781 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 Y_RNA.339-201ENST00000365325 102 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 RNU6-1109P-201ENST00000391187 107 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC098828.1-201ENST00000436164 440 ntBASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms