Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC034105.4-201ENST00000568304 277 ntBASIC4.81□□□□□ -1.64
LRRK2Q5S007 AC233699.1-201ENST00000569955 1168 ntBASIC4.81□□□□□ -1.64
LRRK2Q5S007 RN7SL690P-201ENST00000582087 240 ntBASIC4.81□□□□□ -1.64
LRRK2Q5S007 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
LRRK2Q5S007 AL512782.1-201ENST00000603093 364 ntBASIC4.81□□□□□ -1.64
LRRK2Q5S007 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRK2Q5S007 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRK2Q5S007 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRK2Q5S007 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRK2Q5S007 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRK2Q5S007 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
LRRK2Q5S007 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 RNU2-50P-201ENST00000410494 143 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC007161.1-204ENST00000423039 460 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 BZW1P1-201ENST00000454901 1240 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC015864.1-201ENST00000496512 544 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 RN7SKP21-201ENST00000516503 220 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 OR4A2P-201ENST00000527276 913 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC024940.3-201ENST00000538551 316 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 AL391358.1-201ENST00000605342 190 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 PWAR1-201ENST00000624188 2414 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC022905.1-201ENST00000503430 3048 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 RNU1-149P-201ENST00000390870 161 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 CR383656.1-201ENST00000484916 377 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC004980.4-201ENST00000513375 203 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC005000.1-201ENST00000536192 288 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 uc_338.26-201ENST00000612659 160 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 AC107980.1-201ENST00000558671 3355 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LRRK2Q5S007 IRF5P1-201ENST00000504852 2164 ntBASIC4.8□□□□□ -1.64
LRRK2Q5S007 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRK2Q5S007 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRK2Q5S007 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRK2Q5S007 SNORA57.1-201ENST00000391227 145 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRK2Q5S007 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRK2Q5S007 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 AL359073.1-201ENST00000448036 403 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 IGKV2-23-201ENST00000518729 323 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 IGHV1-14-201ENST00000523391 241 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 HMGB1P40-201ENST00000525121 540 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 UBE2FP2-201ENST00000566646 462 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRK2Q5S007 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 AC010168.2-201ENST00000562691 5428 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRK2Q5S007 DDX39BP1-205ENST00000422507 192 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 AL672138.1-201ENST00000450604 1015 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 RPL7P32-201ENST00000457119 744 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 MTND6P2-201ENST00000512226 524 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRK2Q5S007 AC009117.1-201ENST00000563948 554 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 AC091042.1-201ENST00000579213 173 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 AC090607.5-201ENST00000615692 224 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 AC015660.5-201ENST00000623238 564 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 AC112694.2-201ENST00000623697 768 ntBASIC4.79□□□□□ -1.64
LRRK2Q5S007 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms