Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.24□□□□□ -1.89
HSPG2P98160 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.24□□□□□ -1.89
HSPG2P98160 RN7SL356P-201ENST00000582228 248 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 AC130448.2-201ENST00000624082 374 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HSPG2P98160 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC3.24□□□□□ -1.89
HSPG2P98160 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 AL353763.1-201ENST00000624467 1628 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HSPG2P98160 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.24□□□□□ -1.89
HSPG2P98160 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.24□□□□□ -1.89
HSPG2P98160 AL162739.1-201ENST00000450606 307 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.24□□□□□ -1.89
HSPG2P98160 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.24□□□□□ -1.89
HSPG2P98160 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.24□□□□□ -1.89
HSPG2P98160 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HSPG2P98160 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.24□□□□□ -1.89
HSPG2P98160 AC104964.3-201ENST00000606115 2860 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 CASC19-255ENST00000641733 1385 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC3.24□□□□□ -1.89
HSPG2P98160 BRD7P6-201ENST00000431406 1860 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 CYP1D1P-201ENST00000416662 1433 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HSPG2P98160 OR9G4-201ENST00000302957 984 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 IGKV7-3-201ENST00000357453 298 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 RNU1-24P-201ENST00000364285 165 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 NIFKP7-201ENST00000503365 834 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC3.23□□□□□ -1.89
HSPG2P98160 RNU1-45P-201ENST00000517191 141 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HSPG2P98160 LRRC37A17P-201ENST00000570311 4693 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 MIR3158-1-201ENST00000583596 81 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AC098935.2-201ENST00000604222 466 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AP003789.1-201ENST00000617737 605 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.23□□□□□ -1.89
HSPG2P98160 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.23□□□□□ -1.89
HSPG2P98160 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC3.23□□□□□ -1.89
HSPG2P98160 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 RN7SKP280-201ENST00000364196 304 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 HMGB3P7-201ENST00000400214 611 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 OR4C10P-201ENST00000434991 931 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.23□□□□□ -1.89
HSPG2P98160 AL353748.1-201ENST00000440753 474 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 AC010733.1-201ENST00000451515 401 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AC083899.1-201ENST00000454465 3819 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.23□□□□□ -1.89
HSPG2P98160 AC010326.1-201ENST00000462726 602 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 RPS7P6-201ENST00000485777 579 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 SOX5P1-201ENST00000524155 1127 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC3.23□□□□□ -1.89
HSPG2P98160 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 MIR132-201ENST00000591554 101 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AC073869.8-201ENST00000641806 335 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 ZNF969P-201ENST00000510345 2341 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 AP003972.1-201ENST00000625192 5446 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 AP001324.1-201ENST00000428553 399 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 RPL23AP83-201ENST00000434984 473 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 RPL6P5-201ENST00000445678 828 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms