Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.92□□□□□ -1.46
BRCC3P46736 AL583832.1-201ENST00000603227 784 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.92□□□□□ -1.46
BRCC3P46736 AL512329.2-201ENST00000607350 548 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.92□□□□□ -1.46
BRCC3P46736 AC016769.4-201ENST00000616893 535 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 AL157762.1-201ENST00000619612 415 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 AC010809.3-201ENST00000621310 641 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
BRCC3P46736 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCC3P46736 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
BRCC3P46736 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
BRCC3P46736 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRCC3P46736 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRCC3P46736 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRCC3P46736 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
BRCC3P46736 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCC3P46736 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
BRCC3P46736 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.91□□□□□ -1.46
BRCC3P46736 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
BRCC3P46736 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
BRCC3P46736 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 RNA5SP183-201ENST00000362452 119 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
BRCC3P46736 AC007161.1-204ENST00000423039 460 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 NANOGP4-201ENST00000427230 913 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 AL627308.1-201ENST00000435693 821 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.91□□□□□ -1.46
BRCC3P46736 NANOGP9-201ENST00000439890 892 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.91□□□□□ -1.46
BRCC3P46736 RN7SL727P-201ENST00000482164 296 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.91□□□□□ -1.46
BRCC3P46736 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCC3P46736 HIGD1AP14-201ENST00000507617 282 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCC3P46736 RN7SKP253-201ENST00000516424 309 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.91□□□□□ -1.46
BRCC3P46736 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.91□□□□□ -1.46
BRCC3P46736 AP005403.1-201ENST00000579720 229 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.91□□□□□ -1.46
BRCC3P46736 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCC3P46736 AL137246.1-201ENST00000607072 977 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 AL021707.7-201ENST00000607991 416 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCC3P46736 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.91□□□□□ -1.46
BRCC3P46736 SAMMSON-209ENST00000641222 1100 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCC3P46736 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.91□□□□□ -1.46
BRCC3P46736 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.91□□□□□ -1.46
BRCC3P46736 AC015799.1-201ENST00000622996 3122 ntBASIC5.91□□□□□ -1.46
BRCC3P46736 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
BRCC3P46736 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.91□□□□□ -1.46
BRCC3P46736 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCC3P46736 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.91□□□□□ -1.46
BRCC3P46736 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
BRCC3P46736 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BRCC3P46736 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BRCC3P46736 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BRCC3P46736 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
BRCC3P46736 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.9□□□□□ -1.46
BRCC3P46736 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.9□□□□□ -1.46
BRCC3P46736 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.9□□□□□ -1.46
BRCC3P46736 MIR133B-201ENST00000362210 119 ntBASIC5.9□□□□□ -1.46
BRCC3P46736 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.9□□□□□ -1.46
BRCC3P46736 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
BRCC3P46736 RNU1-136P-201ENST00000384181 164 ntBASIC5.9□□□□□ -1.46
BRCC3P46736 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.9□□□□□ -1.46
BRCC3P46736 RPS26P38-201ENST00000414476 348 ntBASIC5.9□□□□□ -1.46
BRCC3P46736 RNGTTP1-201ENST00000420965 728 ntBASIC5.9□□□□□ -1.46
BRCC3P46736 AL133325.1-201ENST00000421090 382 ntBASIC5.9□□□□□ -1.46
BRCC3P46736 AC105399.1-202ENST00000447303 205 ntBASIC5.9□□□□□ -1.46
BRCC3P46736 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.9□□□□□ -1.46
BRCC3P46736 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.9□□□□□ -1.46
BRCC3P46736 AC093815.1-201ENST00000508637 280 ntBASIC5.9□□□□□ -1.46
BRCC3P46736 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.9□□□□□ -1.46
BRCC3P46736 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
BRCC3P46736 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.9□□□□□ -1.46
BRCC3P46736 PMS2P3-207ENST00000529061 717 ntBASIC5.9□□□□□ -1.46
BRCC3P46736 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.9□□□□□ -1.46
BRCC3P46736 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
BRCC3P46736 RBM22P1-201ENST00000578589 1214 ntBASIC5.9□□□□□ -1.46
BRCC3P46736 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
BRCC3P46736 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
BRCC3P46736 AC018445.2-201ENST00000622987 260 ntBASIC5.9□□□□□ -1.46
BRCC3P46736 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.9□□□□□ -1.46
BRCC3P46736 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
BRCC3P46736 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
BRCC3P46736 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
BRCC3P46736 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms