Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL1P09341 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.22□□□□□ -1.73
CXCL1P09341 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 AL049829.3-202ENST00000604278 711 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 GAPDHP41-201ENST00000613707 975 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL1P09341 RFPL4AP6-201ENST00000616792 846 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 AL512652.1-201ENST00000619006 500 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 AP000648.2-201ENST00000624182 404 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 HSPA8P18-201ENST00000439846 1928 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CXCL1P09341 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL1P09341 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL1P09341 KARSP1-201ENST00000451871 1752 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 AC000123.3-201ENST00000624029 4975 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.22□□□□□ -1.73
CXCL1P09341 OR51C1P-202ENST00000641159 1444 ntBASIC4.21□□□□□ -1.73
CXCL1P09341 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.21□□□□□ -1.74
CXCL1P09341 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.21□□□□□ -1.74
CXCL1P09341 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL1P09341 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.21□□□□□ -1.74
CXCL1P09341 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CXCL1P09341 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CXCL1P09341 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 PSMA6P1-201ENST00000400275 741 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 ZNF37CP-201ENST00000406795 241 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 OR52N3P-201ENST00000413417 934 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.21□□□□□ -1.74
CXCL1P09341 AC007679.3-201ENST00000434035 414 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 NANOGP9-201ENST00000439890 892 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.21□□□□□ -1.74
CXCL1P09341 GEMIN2P1-201ENST00000454246 752 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.21□□□□□ -1.74
CXCL1P09341 AC093890.1-201ENST00000502554 540 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL1P09341 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL1P09341 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.21□□□□□ -1.74
CXCL1P09341 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.21□□□□□ -1.74
CXCL1P09341 AC011840.5-201ENST00000582125 771 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL1P09341 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CXCL1P09341 SMIM12P1-201ENST00000603004 274 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL1P09341 RPSAP75-201ENST00000605848 301 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.21□□□□□ -1.74
CXCL1P09341 U91328.4-201ENST00000608919 517 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CXCL1P09341 MIR6070-201ENST00000613967 103 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 uc_338.7-201ENST00000621834 124 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 AC091059.2-201ENST00000623355 614 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL1P09341 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.21□□□□□ -1.74
CXCL1P09341 AL596275.2-207ENST00000641188 675 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 AL596275.2-204ENST00000641628 552 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 AL596275.2-206ENST00000641957 626 ntBASIC4.21□□□□□ -1.74
CXCL1P09341 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.21□□□□□ -1.74
CXCL1P09341 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CXCL1P09341 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.21□□□□□ -1.74
CXCL1P09341 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL1P09341 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL1P09341 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXCL1P09341 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CXCL1P09341 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL1P09341 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 AC005332.5-201ENST00000591222 2919 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
CXCL1P09341 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CXCL1P09341 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.2□□□□□ -1.74
CXCL1P09341 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CXCL1P09341 BTBD10P1-201ENST00000549824 1352 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 CASC19-221ENST00000641309 1382 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 RNU4-44P-201ENST00000363050 141 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXCL1P09341 RN7SKP108-201ENST00000411367 328 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.2□□□□□ -1.74
CXCL1P09341 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.2□□□□□ -1.74
CXCL1P09341 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.2□□□□□ -1.74
CXCL1P09341 HSPE1P27-201ENST00000430808 296 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.2□□□□□ -1.74
CXCL1P09341 AC022795.1-201ENST00000473808 480 ntBASIC4.2□□□□□ -1.74
CXCL1P09341 AP002453.1-201ENST00000492327 668 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms