Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL359955.2-201ENST00000445380 353 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 AC097463.1-201ENST00000447288 481 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.39□□□□□ -1.71
SSSCA1O60232 CFL1P4-201ENST00000451536 498 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.39□□□□□ -1.71
SSSCA1O60232 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSSCA1O60232 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.39□□□□□ -1.71
SSSCA1O60232 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
SSSCA1O60232 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.39□□□□□ -1.71
SSSCA1O60232 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SSSCA1O60232 OR11H3P-201ENST00000554547 982 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 AL356801.1-201ENST00000559320 294 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 MRPL45P2-203ENST00000573318 473 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 AC022884.2-201ENST00000578535 580 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 AP005403.1-201ENST00000579720 229 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 AC006363.1-201ENST00000603806 463 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.39□□□□□ -1.71
SSSCA1O60232 MIR6793-201ENST00000612376 63 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 AC135068.5-201ENST00000624197 983 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 AL390318.1-201ENST00000624564 687 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSSCA1O60232 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSSCA1O60232 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSSCA1O60232 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSSCA1O60232 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSSCA1O60232 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSSCA1O60232 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSSCA1O60232 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSSCA1O60232 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.38□□□□□ -1.71
SSSCA1O60232 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SSSCA1O60232 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.38□□□□□ -1.71
SSSCA1O60232 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.38□□□□□ -1.71
SSSCA1O60232 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SSSCA1O60232 AC097063.1-201ENST00000426714 1797 ntBASIC4.38□□□□□ -1.71
SSSCA1O60232 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.38□□□□□ -1.71
SSSCA1O60232 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.38□□□□□ -1.71
SSSCA1O60232 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.38□□□□□ -1.71
SSSCA1O60232 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.38□□□□□ -1.71
SSSCA1O60232 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.38□□□□□ -1.71
SSSCA1O60232 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.38□□□□□ -1.71
SSSCA1O60232 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.38□□□□□ -1.71
SSSCA1O60232 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 RPS24P16-201ENST00000497294 392 ntBASIC4.38□□□□□ -1.71
SSSCA1O60232 AC109464.1-201ENST00000511091 819 ntBASIC4.38□□□□□ -1.71
SSSCA1O60232 RN7SKP35-201ENST00000517210 151 ntBASIC4.38□□□□□ -1.71
SSSCA1O60232 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.38□□□□□ -1.71
SSSCA1O60232 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.38□□□□□ -1.71
SSSCA1O60232 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.38□□□□□ -1.71
SSSCA1O60232 HMGN1P26-201ENST00000558737 303 ntBASIC4.38□□□□□ -1.71
SSSCA1O60232 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.38□□□□□ -1.71
SSSCA1O60232 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.38□□□□□ -1.71
SSSCA1O60232 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.38□□□□□ -1.71
SSSCA1O60232 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.38□□□□□ -1.71
SSSCA1O60232 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SSSCA1O60232 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.38□□□□□ -1.71
SSSCA1O60232 AC009027.1-201ENST00000604510 479 ntBASIC4.38□□□□□ -1.71
SSSCA1O60232 AC108673.3-201ENST00000609183 335 ntBASIC4.38□□□□□ -1.71
SSSCA1O60232 AC025574.2-201ENST00000615621 514 ntBASIC4.38□□□□□ -1.71
SSSCA1O60232 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.38□□□□□ -1.71
SSSCA1O60232 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.38□□□□□ -1.71
SSSCA1O60232 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.38□□□□□ -1.71
SSSCA1O60232 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
SSSCA1O60232 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSSCA1O60232 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSSCA1O60232 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSSCA1O60232 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.37□□□□□ -1.71
SSSCA1O60232 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSSCA1O60232 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.37□□□□□ -1.71
SSSCA1O60232 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.37□□□□□ -1.71
SSSCA1O60232 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.37□□□□□ -1.71
SSSCA1O60232 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.37□□□□□ -1.71
SSSCA1O60232 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.37□□□□□ -1.71
SSSCA1O60232 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSSCA1O60232 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SSSCA1O60232 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SSSCA1O60232 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.37□□□□□ -1.71
SSSCA1O60232 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.37□□□□□ -1.71
SSSCA1O60232 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSSCA1O60232 RN7SKP38-201ENST00000410782 309 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms