Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SOX1O00570 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 AC125603.4-201ENST00000621942 2699 ntBASIC7.26□□□□□ -1.25
SOX1O00570 MFSD8-218ENST00000641186 4448 ntBASIC7.26□□□□□ -1.25
SOX1O00570 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX1O00570 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SOX1O00570 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.26□□□□□ -1.25
SOX1O00570 AL391994.1-201ENST00000254724 282 ntBASIC7.26□□□□□ -1.25
SOX1O00570 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 OR56B2P-201ENST00000317102 954 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AL672167.1-206ENST00000356293 943 ntBASIC7.26□□□□□ -1.25
SOX1O00570 RN7SKP174-201ENST00000363803 330 ntBASIC7.26□□□□□ -1.25
SOX1O00570 RN7SKP292-201ENST00000365522 317 ntBASIC7.26□□□□□ -1.25
SOX1O00570 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 RNA5SP474-201ENST00000391234 90 ntBASIC7.26□□□□□ -1.25
SOX1O00570 DPPA2P3-201ENST00000411853 655 ntBASIC7.26□□□□□ -1.25
SOX1O00570 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX1O00570 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX1O00570 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX1O00570 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX1O00570 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SOX1O00570 AL590103.1-201ENST00000434488 307 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AL627308.1-201ENST00000435693 821 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX1O00570 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX1O00570 AL603882.1-201ENST00000463059 681 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AC104090.1-201ENST00000506341 1171 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX1O00570 RNA5SP362-201ENST00000516048 118 ntBASIC7.26□□□□□ -1.25
SOX1O00570 RNA5SP340-201ENST00000517132 107 ntBASIC7.26□□□□□ -1.25
SOX1O00570 TBCA-206ENST00000518338 551 ntTSL 2 BASIC7.26□□□□□ -1.25
SOX1O00570 AC106038.2-201ENST00000520706 568 ntBASIC7.26□□□□□ -1.25
SOX1O00570 IGKV2-18-201ENST00000522607 343 ntBASIC7.26□□□□□ -1.25
SOX1O00570 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX1O00570 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC7.26□□□□□ -1.25
SOX1O00570 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX1O00570 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC7.26□□□□□ -1.25
SOX1O00570 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.26□□□□□ -1.25
SOX1O00570 HIGD1AP17-201ENST00000554576 276 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX1O00570 AC079171.1-201ENST00000568788 914 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX1O00570 OR4G1P-201ENST00000588632 938 ntBASIC7.26□□□□□ -1.25
SOX1O00570 SLC25A36P1-201ENST00000590111 465 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX1O00570 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.26□□□□□ -1.25
SOX1O00570 AL392112.1-201ENST00000605115 829 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AL161729.2-201ENST00000605700 456 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AC104184.1-201ENST00000607513 721 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX1O00570 AC129778.1-202ENST00000623812 261 ntBASIC7.26□□□□□ -1.25
SOX1O00570 SEPT14P19-203ENST00000633205 211 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AL591379.1-207ENST00000635982 261 ntBASIC7.26□□□□□ -1.25
SOX1O00570 MIR4278-201ENST00000636094 69 ntBASIC7.26□□□□□ -1.25
SOX1O00570 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.26□□□□□ -1.25
SOX1O00570 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX1O00570 SAMMSON-209ENST00000641222 1100 ntBASIC7.26□□□□□ -1.25
SOX1O00570 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
SOX1O00570 AL133320.1-201ENST00000621423 2352 ntBASIC7.26□□□□□ -1.25
SOX1O00570 CASC19-246ENST00000641625 1606 ntBASIC7.26□□□□□ -1.25
SOX1O00570 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX1O00570 AC110998.1-201ENST00000519029 2053 ntBASIC7.26□□□□□ -1.25
SOX1O00570 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
SOX1O00570 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX1O00570 AP000776.1-201ENST00000530032 1663 ntBASIC7.25□□□□□ -1.25
SOX1O00570 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SOX1O00570 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.25□□□□□ -1.25
SOX1O00570 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX1O00570 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SOX1O00570 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.25□□□□□ -1.25
SOX1O00570 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SOX1O00570 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SOX1O00570 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
SOX1O00570 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SOX1O00570 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SOX1O00570 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.25□□□□□ -1.25
SOX1O00570 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SOX1O00570 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SOX1O00570 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SOX1O00570 AL359694.1-201ENST00000403247 604 ntBASIC7.25□□□□□ -1.25
SOX1O00570 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SOX1O00570 AP000534.2-201ENST00000412729 568 ntBASIC7.25□□□□□ -1.25
SOX1O00570 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX1O00570 RPS27AP7-201ENST00000422792 455 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms