Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 SNORD56.6-201ENST00000384569 71 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 MIR130A-201ENST00000385274 89 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AL157702.1-201ENST00000398764 426 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 GPN3P1-201ENST00000423883 535 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC130360.1-201ENST00000425489 1117 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC017019.1-201ENST00000426129 261 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 KCTD9P1-201ENST00000430462 1167 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 RPSAP41-201ENST00000439695 860 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 CXCR2P1-202ENST00000443392 1074 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC004890.1-201ENST00000461005 181 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AL157777.1-201ENST00000468100 304 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 HMGN1P9-201ENST00000515212 298 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 RNU6-943P-201ENST00000516960 98 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC130365.2-201ENST00000525882 1201 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 OR9G2P-201ENST00000533326 880 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 SETP1-201ENST00000556014 845 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 WBP1LP11-201ENST00000586141 328 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC026898.1-201ENST00000586404 571 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 MIR6885-201ENST00000612241 66 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AL139099.4-201ENST00000614802 114 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC015660.5-201ENST00000623238 564 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AL450345.1-202ENST00000605741 3881 ntBASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RBFOX3A6NFN3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC007738.1-201ENST00000413892 348 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 Z82198.3-201ENST00000421145 199 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 OR2AH1P-201ENST00000425717 928 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC094019.1-201ENST00000434678 472 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 SNRPFP2-201ENST00000440710 251 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 RPL12P49-201ENST00000441100 121 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 SEPT14P12-201ENST00000442280 560 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC245291.3-201ENST00000443400 292 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 RBMY2HP-201ENST00000457961 720 ntBASIC4.37□□□□□ -1.71
RBFOX3A6NFN3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms