Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 DDX18P6-201ENST00000450119 1997 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 MTND5P31-201ENST00000419366 1374 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 RNU1-65P-201ENST00000363919 148 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 ST13P16-201ENST00000401760 781 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 ZNF602P-201ENST00000405929 924 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 TCEA1P2-201ENST00000420496 906 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 MTND4LP13-201ENST00000425022 298 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 RPL12P28-201ENST00000430852 489 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AL096829.2-201ENST00000446582 742 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 HIGD1AP16-201ENST00000450986 258 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 RPL34P33-201ENST00000486062 334 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 RPS27P20-201ENST00000492051 246 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC112518.2-201ENST00000508565 425 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 MTATP6P15-201ENST00000527233 835 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC090888.2-201ENST00000559765 1144 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 MIR4271-201ENST00000582451 67 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 EIF1P5-201ENST00000585002 234 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC005242.1-201ENST00000585658 438 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 MIR132-201ENST00000591554 101 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 DYNLL1P1-201ENST00000595442 269 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AP001160.4-201ENST00000596971 382 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC067838.1-201ENST00000606064 577 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC112503.1-201ENST00000608436 391 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC093783.1-201ENST00000612976 329 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 RFPL4AP6-201ENST00000616792 846 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AP002967.1-201ENST00000624203 539 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AC010325.3-201ENST00000641084 394 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 OR5AC4P-202ENST00000642086 985 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 LINC01613-201ENST00000561476 2780 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 AL359955.1-201ENST00000455242 3275 ntBASIC6.2□□□□□ -1.42
CCDC78A2IDD5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC78A2IDD5 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 GTF2IP4-201ENST00000453092 2054 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 AC116158.1-201ENST00000560231 2129 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 SEPT7P8-201ENST00000413308 775 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 MTATP6P20-201ENST00000414147 562 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 AC092865.3-201ENST00000425390 1026 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 AC245884.2-201ENST00000426257 404 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 AC006994.1-201ENST00000438212 839 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 AL645936.1-201ENST00000441979 518 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 EIF2S2P2-201ENST00000447161 982 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 AL358876.1-201ENST00000453364 1075 ntBASIC6.19□□□□□ -1.42
CCDC78A2IDD5 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC78A2IDD5 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms