Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC008498.2-201ENST00000624033 2322 ntBASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC046144.1-201ENST00000478559 1853 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC090771.1-201ENST00000585803 1618 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AL136298.2-201ENST00000556497 1570 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 VEZF1P1-201ENST00000423931 1541 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 OR4K15-201ENST00000305051 1216 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 RPS24P12-201ENST00000402084 394 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 RN7SKP232-201ENST00000410170 290 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 FCF1P2-201ENST00000415284 583 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC002367.1-201ENST00000416765 405 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC069157.1-201ENST00000421749 137 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AL034379.1-201ENST00000423216 253 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC073464.1-201ENST00000429823 534 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 BMS1P19-201ENST00000433925 393 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 RABEPKP1-201ENST00000440529 1026 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 MTND5P14-201ENST00000441481 1267 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 NPM1P39-201ENST00000449818 867 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 RN7SL55P-201ENST00000464534 297 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 RPL5P33-201ENST00000487833 905 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 RNF138P1-201ENST00000502765 546 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 NENFP3-201ENST00000503735 313 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 MTND5P5-201ENST00000503764 376 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC109811.2-201ENST00000509609 452 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 SCARNA20.1-201ENST00000516009 138 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 SNORA18.6-201ENST00000516792 115 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC138832.1-201ENST00000522871 556 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC025252.2-201ENST00000537470 502 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC063923.2-201ENST00000562158 928 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 RN7SL376P-201ENST00000578594 264 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC005261.5-201ENST00000596280 355 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 FRG1KP-201ENST00000623592 341 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC130448.2-201ENST00000624082 374 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC026108.1-201ENST00000635444 547 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 MFSD8-217ENST00000641178 4374 ntBASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHGA11Q9Y5H2 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
PCDHGA11Q9Y5H2 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHGA11Q9Y5H2 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHGA11Q9Y5H2 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
PCDHGA11Q9Y5H2 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHGA11Q9Y5H2 OR52B5P-204ENST00000641744 3467 ntBASIC7.38□□□□□ -1.23
PCDHGA11Q9Y5H2 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHGA11Q9Y5H2 OR5E1P-201ENST00000305754 927 ntBASIC7.38□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHGA11Q9Y5H2 RNA5SP463-201ENST00000363030 120 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms