Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
PCDHB13Q9Y5F0 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PCDHB13Q9Y5F0 FMO10P-201ENST00000455032 1493 ntBASIC9.32□□□□□ -0.92
PCDHB13Q9Y5F0 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
PCDHB13Q9Y5F0 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PCDHB13Q9Y5F0 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PCDHB13Q9Y5F0 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PCDHB13Q9Y5F0 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PCDHB13Q9Y5F0 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PCDHB13Q9Y5F0 POU3F4-201ENST00000373200 3878 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 SKAP1-201ENST00000336915 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 HSPD1P5-201ENST00000511127 1720 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AL512646.1-201ENST00000269395 1077 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 RNA5SP250-201ENST00000362534 119 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 RNA5SP78-201ENST00000364622 118 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 Y_RNA.373-201ENST00000365600 103 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 SNORA20.2-201ENST00000383922 131 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 SNORA14B-201ENST00000384452 135 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 BTBD10P2-201ENST00000404779 676 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AL136968.2-201ENST00000407959 354 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 MIR1269A-201ENST00000408636 105 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AL137014.1-201ENST00000420490 1226 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 HMGB1P7-201ENST00000450921 612 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 TAAR3P-201ENST00000466706 1078 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 SLC25A51P1-201ENST00000468432 871 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 TAAR3P-202ENST00000481759 1025 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 GAPDHP22-201ENST00000491037 413 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 BTG4P1-201ENST00000510421 183 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AC006499.2-201ENST00000513470 337 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AC093281.1-201ENST00000514239 549 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 MIR548AI-201ENST00000579940 88 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AC006557.4-201ENST00000585516 830 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AC104184.1-201ENST00000607513 721 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AC106782.6-201ENST00000611264 512 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 MIR6505-201ENST00000617206 71 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AC091953.4-201ENST00000625179 341 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 Z83820.1-201ENST00000456978 1499 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 EIF4BP5-201ENST00000567338 1795 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AL133384.2-201ENST00000623755 2954 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 ATP5A1P4-201ENST00000556888 1605 ntBASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PCDHB13Q9Y5F0 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC9.3□□□□□ -0.92
PCDHB13Q9Y5F0 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PCDHB13Q9Y5F0 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms