Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 RPS4XP10-201ENST00000465034 731 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC108693.1-201ENST00000496068 432 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC091885.1-201ENST00000506658 268 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 SNORA25.10-201ENST00000515926 124 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC124068.1-201ENST00000563131 678 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC097468.3-201ENST00000607956 456 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 RN7SL82P-201ENST00000611435 237 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 RN7SL628P-201ENST00000619139 237 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 MIR6732-201ENST00000619365 60 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 TRIM53BP-201ENST00000532912 1720 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 HSPD1P4-201ENST00000547203 1702 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AL008638.3-201ENST00000623027 5182 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC009090.4-201ENST00000623921 3691 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 TRIM51EP-201ENST00000524374 1516 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 TARS2P1-201ENST00000506124 2041 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 AC093616.1-201ENST00000427434 2095 ntBASIC8.22□□□□□ -1.09
VPS9D1Q9Y2B5 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 AC007614.2-201ENST00000569877 1851 ntBASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 PWAR5-201ENST00000624480 3180 ntBASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 WASF4P-201ENST00000444248 1494 ntBASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.21□□□□□ -1.09
VPS9D1Q9Y2B5 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AC010132.2-201ENST00000295493 1043 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AHCYP5-201ENST00000331585 1238 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 RPL7P25-201ENST00000404151 721 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 RNU6-77P-201ENST00000410554 91 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AC127391.1-201ENST00000411737 98 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 HNRNPDLP1-201ENST00000412834 550 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AL031733.1-201ENST00000422817 455 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 OR10T1P-201ENST00000424327 947 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AL356276.2-201ENST00000435919 558 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 CFL1P8-201ENST00000436148 475 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 FABP5P14-201ENST00000437273 393 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 GAPDHP23-201ENST00000444823 993 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AL451074.1-202ENST00000453762 989 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 YAP1P2-201ENST00000455104 610 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 RPL12P25-201ENST00000455592 494 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AL034397.1-201ENST00000456392 908 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 RPL7P15-201ENST00000461190 712 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AC010307.1-201ENST00000467206 836 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 HMGB1P28-201ENST00000507778 552 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 RNU6-416P-201ENST00000516265 103 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 RNY3P15-201ENST00000516297 97 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 RPS20-204ENST00000519606 424 ntTSL 3 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 OR5B10P-201ENST00000532869 642 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 POLR2KP1-201ENST00000553226 168 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AC090607.2-201ENST00000560331 695 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AC027796.1-201ENST00000575593 512 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 AC025198.1-201ENST00000578331 419 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 MIR4450-201ENST00000583589 65 ntBASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC8.21□□□□□ -1.1
VPS9D1Q9Y2B5 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms