Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 Y_RNA.493-201ENST00000384422 102 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 Y_RNA.646-201ENST00000410980 101 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 RPL12P27-201ENST00000414870 496 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AL590135.1-201ENST00000422215 156 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 YWHAZP8-201ENST00000436935 731 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 GSTA11P-201ENST00000452866 669 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 TRGVB-201ENST00000453257 471 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 SBDSP1-204ENST00000453858 737 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 RPL10AP3-201ENST00000462503 651 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 RN7SL745P-201ENST00000484900 299 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC084337.1-201ENST00000524809 686 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC010768.2-201ENST00000532524 567 ntTSL 4 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 OR7E161P-201ENST00000533722 967 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 EIF4EBP1P1-201ENST00000557776 341 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC093249.5-201ENST00000568120 430 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 MIR3133-201ENST00000583157 78 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC245052.7-201ENST00000601161 359 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 RNF138P2-201ENST00000603490 592 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 NDUFB9P1-201ENST00000604683 510 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC093909.6-201ENST00000624757 775 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 ABBA01040607.1-201ENST00000640749 321 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 GNE-206ENST00000543356 2576 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 KLHL1-202ENST00000545028 3966 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AL157831.2-201ENST00000564681 3095 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AL049780.3-201ENST00000624612 1583 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 TP63-212ENST00000456148 1749 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 MTND5P7-201ENST00000413558 1798 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AP001527.1-201ENST00000566440 1957 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 ZNF610-203ENST00000403906 2191 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 RNY1P12-201ENST00000364251 105 ntBASIC8.16□□□□□ -1.1
LHX6Q9UPM6 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 MIR506-201ENST00000384998 124 ntBASIC8.16□□□□□ -1.1
LHX6Q9UPM6 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 CAP1P2-201ENST00000417455 1409 ntBASIC8.16□□□□□ -1.1
LHX6Q9UPM6 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC8.16□□□□□ -1.1
LHX6Q9UPM6 AL139396.1-201ENST00000421137 167 ntBASIC8.16□□□□□ -1.1
LHX6Q9UPM6 AL353777.1-201ENST00000425552 326 ntBASIC8.16□□□□□ -1.1
LHX6Q9UPM6 HSPE1P16-201ENST00000426640 348 ntBASIC8.16□□□□□ -1.1
LHX6Q9UPM6 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms