Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC092159.4-201ENST00000624944 550 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AC073365.1-203ENST00000641055 1992 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 RACGAP1P-201ENST00000550663 1879 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 AP003486.1-201ENST00000525716 3994 ntBASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SEC61A2Q9H9S3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC034229.2-201ENST00000566945 2508 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 Z97989.1-201ENST00000531702 2421 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 RPL24P4-201ENST00000326586 421 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC023490.2-201ENST00000359859 470 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 SNORD116.1-201ENST00000365628 92 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 RNU6-1215P-201ENST00000384441 102 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AL079341.1-201ENST00000404701 1207 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 RN7SKP91-201ENST00000410852 288 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC006366.1-201ENST00000422002 759 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC019178.2-201ENST00000423595 505 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 E2F6P1-201ENST00000428850 745 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 NEK4P1-201ENST00000433383 879 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AL590128.1-201ENST00000433407 286 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 PPIAP32-201ENST00000449940 472 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 RN7SL790P-201ENST00000474043 298 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC010424.1-201ENST00000506336 297 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AL121834.1-201ENST00000572284 509 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC090616.2-202ENST00000584248 222 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AP001269.3-201ENST00000588718 329 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AL031985.2-201ENST00000600955 480 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC106791.2-201ENST00000604680 391 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC009237.15-201ENST00000610252 501 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 MIR6849-201ENST00000618543 69 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC019226.1-201ENST00000625666 515 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AL596275.2-207ENST00000641188 675 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC096992.2-201ENST00000609553 1684 ntBASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
SEC61A2Q9H9S3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms