Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 AC016550.3-201ENST00000515706 767 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 Y_RNA.667-201ENST00000516212 107 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 HMGB1P46-201ENST00000520062 610 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 OR56A7P-201ENST00000524865 941 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 AC130365.2-201ENST00000525882 1201 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 LINC00556-201ENST00000569603 412 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 AL163952.1-202ENST00000569625 600 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 uc_338.26-201ENST00000612659 160 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 AL133370.2-201ENST00000619934 439 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CHMP4CQ96CF2 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CHMP4CQ96CF2 MTCO1P28-201ENST00000574177 1528 ntBASIC7.15□□□□□ -1.27
CHMP4CQ96CF2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.15□□□□□ -1.27
CHMP4CQ96CF2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CHMP4CQ96CF2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
CHMP4CQ96CF2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.15□□□□□ -1.27
CHMP4CQ96CF2 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CHMP4CQ96CF2 AC112255.1-201ENST00000624070 2493 ntBASIC7.15□□□□□ -1.27
CHMP4CQ96CF2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AL356317.1-201ENST00000396110 1436 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 RPS26P4-201ENST00000431743 355 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 XKRY2-201ENST00000442362 1093 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 SAMM50P1-201ENST00000455403 1399 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 UBFD1P1-201ENST00000473259 814 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AC083795.1-201ENST00000491760 320 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 VTA1P2-201ENST00000520205 911 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 BNIP3P39-201ENST00000601077 554 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AC005776.1-201ENST00000603164 290 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AL096803.3-201ENST00000609032 532 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AL592494.3-201ENST00000609485 464 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AL136228.1-201ENST00000622221 319 ntBASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHMP4CQ96CF2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AF287957.1-201ENST00000607368 1595 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AC017002.4-201ENST00000604721 1525 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 SNORD65-201ENST00000391079 73 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AL096711.1-201ENST00000404780 554 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 MTND2P15-201ENST00000418575 892 ntBASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.13□□□□□ -1.27
CHMP4CQ96CF2 CCRL1P1-201ENST00000449542 1053 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms