Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AP002512.4-202ENST00000641599 4530 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AP004607.3-201ENST00000530354 3915 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 OR10AB1P-202ENST00000641219 1686 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 MIR551B-201ENST00000384984 96 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 RNA5SP91-201ENST00000390902 119 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 RAB5CP1-201ENST00000395972 580 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 RPL35AP3-201ENST00000414680 288 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC099782.1-201ENST00000425889 474 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 CRIP1P1-201ENST00000427567 185 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC096775.1-201ENST00000437724 448 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AL353662.1-201ENST00000439099 327 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 RRM2P4-201ENST00000441721 562 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AL445466.1-201ENST00000448432 357 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 DUXAP8-207ENST00000456786 622 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC068587.2-201ENST00000478386 781 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 PRELID3BP6-201ENST00000503839 571 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 MTCO1P31-201ENST00000506355 492 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 HMGB1P46-201ENST00000520062 610 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC005242.1-201ENST00000585658 438 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 DUXAP10-204ENST00000612052 616 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC008759.3-201ENST00000613300 508 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AP000484.1-201ENST00000620067 1252 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AL357140.4-201ENST00000636827 412 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 WDR95P-201ENST00000425638 1542 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC017002.4-201ENST00000604721 1525 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 GNL2P1-201ENST00000451274 2190 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC140479.2-201ENST00000421567 3130 ntBASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.07□□□□□ -1.44
ATG4AQ8WYN0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AC114774.1-201ENST00000507410 1770 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AL096711.1-201ENST00000404780 554 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AL354868.1-201ENST00000417077 482 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 VN1R31P-201ENST00000417498 730 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 ARL2BPP3-201ENST00000421226 480 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 MTND4LP13-201ENST00000425022 298 ntBASIC6.06□□□□□ -1.44
ATG4AQ8WYN0 AC092447.3-201ENST00000426027 686 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms