Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 PPBPP2-201ENST00000513150 1362 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC008432.1-201ENST00000615912 1320 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 SNORA43.1-201ENST00000364863 140 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 SNORA72.3-201ENST00000365074 132 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 RNU6-354P-201ENST00000383862 107 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 RNU6-610P-201ENST00000384264 107 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 MIR431-201ENST00000385266 114 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 SNORD94-201ENST00000386037 137 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 ATP5HP3-201ENST00000396994 486 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 MIR1266-201ENST00000408125 84 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 RNU2-17P-201ENST00000410290 190 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 XKRYP4-201ENST00000414395 483 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC006509.1-201ENST00000420788 634 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 SFR1P2-201ENST00000421841 730 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC006994.1-201ENST00000438212 839 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC010240.2-201ENST00000445363 1205 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 XKRYP5-201ENST00000449659 483 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AL445991.1-201ENST00000450381 475 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 RBMY2TP-201ENST00000451162 947 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 RN7SL552P-201ENST00000462094 276 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 ST13P12-201ENST00000508958 1094 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 OR9G2P-201ENST00000533326 880 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC008055.1-201ENST00000547032 609 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC090666.1-201ENST00000578241 445 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC010487.1-201ENST00000594408 1172 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC036176.3-201ENST00000602456 418 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC002069.2-201ENST00000603580 883 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC021851.1-201ENST00000608537 1082 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AL137067.2-201ENST00000621202 131 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 OR4G3P-201ENST00000633500 913 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AP001284.1-201ENST00000528393 2118 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 AC107021.2-201ENST00000567714 2095 ntBASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
DNAAF1Q8NEP3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 AC015689.2-201ENST00000528172 1738 ntBASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 AC138907.8-201ENST00000623981 2256 ntBASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 AC024587.1-201ENST00000505925 2157 ntBASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 RNU4-7P-201ENST00000364758 141 ntBASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 CHMP1B2P-201ENST00000399581 597 ntBASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
DNAAF1Q8NEP3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms