Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 MITF-202ENST00000314589 1993 ntTSL 2 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 RNA5SP336-201ENST00000364189 117 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 FHL1-203ENST00000370676 833 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 RNU1-8P-201ENST00000384328 165 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 RNVU1-15-201ENST00000384476 165 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 OR4F1P-201ENST00000405102 938 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AL136133.1-201ENST00000413694 376 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC127526.2-201ENST00000426436 775 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC002504.1-201ENST00000438281 691 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 WDR82P1-201ENST00000439836 939 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 GAGE12J-201ENST00000442437 541 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 BMS1P10-201ENST00000443754 1120 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 GAPDHP28-201ENST00000455134 1003 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 RN7SL395P-201ENST00000462960 291 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 RNF138P1-201ENST00000502765 546 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 MTCYBP17-201ENST00000503579 789 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC114981.1-201ENST00000503897 678 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 POU5F1P7-201ENST00000508759 541 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 HSD3BP4-201ENST00000511509 1120 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC008429.4-201ENST00000521201 182 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 OR8L1P-201ENST00000534005 955 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 OR4F28P-201ENST00000559128 938 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC127024.5-201ENST00000580085 462 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC011444.4-201ENST00000586415 418 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 OR4F8P-201ENST00000589943 937 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AL009028.1-201ENST00000604895 802 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC000068.3-201ENST00000607934 427 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC104010.1-201ENST00000616889 150 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 MIR6829-201ENST00000620375 67 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC112204.3-201ENST00000623822 332 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AC005618.4-201ENST00000625053 554 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AL596275.2-203ENST00000641951 371 ntBASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.31□□□□□ -1.24
DEPDC4Q8N2C3 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms