Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
LYSMD4Q5XG99 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.63□□□□□ -1.51
LYSMD4Q5XG99 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.63□□□□□ -1.51
LYSMD4Q5XG99 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
LYSMD4Q5XG99 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LYSMD4Q5XG99 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LYSMD4Q5XG99 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
LYSMD4Q5XG99 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LYSMD4Q5XG99 MAPK10-270ENST00000641102 3538 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 MIR765-201ENST00000390226 114 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 MIR550A3-201ENST00000390735 95 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 RPL37P18-201ENST00000411602 243 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 GABARAPL3-201ENST00000412799 354 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 AL133325.1-201ENST00000421090 382 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 CEACAMP7-201ENST00000444105 496 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 CBX1P5-201ENST00000475330 559 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 GOLGA5P1-201ENST00000507317 980 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 AC022832.1-201ENST00000530718 645 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 RN7SL708P-201ENST00000580952 299 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 PRELID3BP3-201ENST00000584963 545 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 VN1R81P-201ENST00000602085 372 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 AL391597.1-201ENST00000618707 694 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 FBXL21-201ENST00000297158 1305 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 CDY5P-201ENST00000411487 1580 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 CDY9P-201ENST00000451397 1580 ntBASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD4Q5XG99 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC103591.2-201ENST00000265259 766 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 RN7SKP115-201ENST00000363177 317 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 U8.4-201ENST00000363626 134 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 CBX1P3-201ENST00000413296 527 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC006335.2-201ENST00000437993 330 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC245047.2-201ENST00000441060 530 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC073072.2-201ENST00000447425 348 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC091685.2-201ENST00000454924 864 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 RPS23P2-201ENST00000463671 415 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 RN7SL447P-201ENST00000494711 245 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC092593.2-201ENST00000513866 913 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 SNORA48.9-201ENST00000516419 162 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 NPM1P5-201ENST00000557228 838 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 AC130304.1-201ENST00000622942 2385 ntBASIC5.61□□□□□ -1.51
LYSMD4Q5XG99 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms