Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 MIR7155-201ENST00000615925 56 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 MRRFP1-201ENST00000435941 1675 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 RPL23P2-201ENST00000320371 421 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 SNORA74A-201ENST00000364089 198 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 RNU4-2-201ENST00000365668 141 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 SNORA70H-201ENST00000383910 135 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 SNORA70J-201ENST00000384182 135 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 PSMD10P3-201ENST00000437000 448 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 CDC42P3-201ENST00000518493 633 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 AL121594.2-201ENST00000541658 472 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 MIR3691-201ENST00000578066 90 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 MIR4311-201ENST00000580794 100 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 AC005229.3-201ENST00000603438 323 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 MIR6837-201ENST00000620884 64 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 AC021422.1-201ENST00000621212 473 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 AC020763.5-201ENST00000623298 430 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 AP002505.2-201ENST00000623585 696 ntBASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.53□□□□□ -1.36
SHROOM1Q2M3G4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
SHROOM1Q2M3G4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 U8.4-201ENST00000363626 134 ntBASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 RNU1-106P-201ENST00000384382 164 ntBASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 AC010740.1-201ENST00000417035 684 ntBASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 AC092106.1-201ENST00000444291 373 ntBASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 AL161722.1-201ENST00000446972 1032 ntBASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 OR8G3P-201ENST00000533406 921 ntBASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 AC125494.2-201ENST00000602431 657 ntBASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 SAMMSON-227ENST00000642114 1199 ntBASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHROOM1Q2M3G4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AL117378.2-201ENST00000622916 1337 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AC009779.8-201ENST00000641684 4384 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 RNA5SP339-201ENST00000390987 122 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AL133388.1-201ENST00000404509 287 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 RN7SL610P-201ENST00000463845 291 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AC110775.1-201ENST00000513721 462 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 RNU6-941P-201ENST00000516346 108 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 OR10G5P-201ENST00000532733 358 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AL352984.2-202ENST00000613699 155 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 AC090510.2-201ENST00000617465 629 ntBASIC6.51□□□□□ -1.37
SHROOM1Q2M3G4 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms