Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC7.72□□□□□ -1.17
MSH6P52701 AC004890.3-201ENST00000605566 1095 ntBASIC7.72□□□□□ -1.17
MSH6P52701 AL133406.3-201ENST00000606817 541 ntBASIC7.72□□□□□ -1.17
MSH6P52701 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.72□□□□□ -1.17
MSH6P52701 OR55B1P-203ENST00000641518 2602 ntBASIC7.72□□□□□ -1.17
MSH6P52701 AP004607.3-201ENST00000530354 3915 ntBASIC7.72□□□□□ -1.17
MSH6P52701 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MSH6P52701 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
MSH6P52701 OR9K1P-202ENST00000641111 3217 ntBASIC7.72□□□□□ -1.17
MSH6P52701 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MSH6P52701 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.72□□□□□ -1.17
MSH6P52701 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
MSH6P52701 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MSH6P52701 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MSH6P52701 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.72□□□□□ -1.17
MSH6P52701 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.72□□□□□ -1.17
MSH6P52701 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MSH6P52701 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MSH6P52701 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MSH6P52701 AC073342.2-201ENST00000595842 1800 ntBASIC7.72□□□□□ -1.17
MSH6P52701 AL133388.1-201ENST00000404509 287 ntBASIC7.71□□□□□ -1.17
MSH6P52701 AC016712.1-201ENST00000431088 378 ntBASIC7.71□□□□□ -1.17
MSH6P52701 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC7.71□□□□□ -1.17
MSH6P52701 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC7.71□□□□□ -1.17
MSH6P52701 IGLV3-24-201ENST00000517477 197 ntBASIC7.71□□□□□ -1.17
MSH6P52701 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC7.71□□□□□ -1.17
MSH6P52701 AC024940.3-201ENST00000538551 316 ntBASIC7.71□□□□□ -1.17
MSH6P52701 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC7.71□□□□□ -1.17
MSH6P52701 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC7.71□□□□□ -1.17
MSH6P52701 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
MSH6P52701 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC7.71□□□□□ -1.17
MSH6P52701 MIR132-201ENST00000591554 101 ntBASIC7.71□□□□□ -1.17
MSH6P52701 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
MSH6P52701 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.71□□□□□ -1.17
MSH6P52701 AC093829.1-201ENST00000506662 1618 ntBASIC7.71□□□□□ -1.17
MSH6P52701 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
MSH6P52701 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.71□□□□□ -1.18
MSH6P52701 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
MSH6P52701 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.71□□□□□ -1.18
MSH6P52701 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
MSH6P52701 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
MSH6P52701 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
MSH6P52701 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
MSH6P52701 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.71□□□□□ -1.18
MSH6P52701 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.71□□□□□ -1.18
MSH6P52701 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
MSH6P52701 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
MSH6P52701 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
MSH6P52701 SNORA62-201ENST00000365493 153 ntBASIC7.71□□□□□ -1.18
MSH6P52701 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.71□□□□□ -1.18
MSH6P52701 PPP2R2DP1-201ENST00000420526 637 ntBASIC7.71□□□□□ -1.18
MSH6P52701 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC7.71□□□□□ -1.18
MSH6P52701 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC7.71□□□□□ -1.18
MSH6P52701 TRY2P-201ENST00000448860 689 ntBASIC7.71□□□□□ -1.18
MSH6P52701 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.71□□□□□ -1.18
MSH6P52701 DUTP1-201ENST00000493631 470 ntBASIC7.71□□□□□ -1.18
MSH6P52701 C1GALT1P3-201ENST00000522049 819 ntBASIC7.71□□□□□ -1.18
MSH6P52701 AC209154.1-201ENST00000582156 337 ntBASIC7.71□□□□□ -1.18
MSH6P52701 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
MSH6P52701 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.71□□□□□ -1.18
MSH6P52701 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
MSH6P52701 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
MSH6P52701 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
MSH6P52701 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
MSH6P52701 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.7□□□□□ -1.18
MSH6P52701 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
MSH6P52701 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.7□□□□□ -1.18
MSH6P52701 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
MSH6P52701 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
MSH6P52701 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
MSH6P52701 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.7□□□□□ -1.18
MSH6P52701 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
MSH6P52701 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
MSH6P52701 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
MSH6P52701 PWAR1-201ENST00000624188 2414 ntBASIC7.7□□□□□ -1.18
MSH6P52701 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.7□□□□□ -1.18
MSH6P52701 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
MSH6P52701 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
MSH6P52701 GNAS-202ENST00000306090 477 ntTSL 5 BASIC7.7□□□□□ -1.18
MSH6P52701 RN7SKP113-201ENST00000363891 295 ntBASIC7.7□□□□□ -1.18
MSH6P52701 SNORA70H-201ENST00000383910 135 ntBASIC7.7□□□□□ -1.18
MSH6P52701 SNORA70J-201ENST00000384182 135 ntBASIC7.7□□□□□ -1.18
MSH6P52701 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC7.7□□□□□ -1.18
MSH6P52701 RPS3AP38-201ENST00000435889 763 ntBASIC7.7□□□□□ -1.18
MSH6P52701 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.7□□□□□ -1.18
MSH6P52701 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.7□□□□□ -1.18
MSH6P52701 AC091153.1-201ENST00000466297 402 ntBASIC7.7□□□□□ -1.18
MSH6P52701 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.7□□□□□ -1.18
MSH6P52701 DPPA3P2-202ENST00000557188 1219 ntBASIC7.7□□□□□ -1.18
MSH6P52701 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC7.7□□□□□ -1.18
MSH6P52701 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.7□□□□□ -1.18
MSH6P52701 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.7□□□□□ -1.18
MSH6P52701 AC091905.4-201ENST00000623432 202 ntBASIC7.7□□□□□ -1.18
MSH6P52701 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
MSH6P52701 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
MSH6P52701 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
MSH6P52701 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
MSH6P52701 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
MSH6P52701 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.69□□□□□ -1.18
MSH6P52701 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms