Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC9.56□□□□□ -0.88
SMARCA4P51532 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC9.56□□□□□ -0.88
SMARCA4P51532 snoU109.5-201ENST00000516231 132 ntBASIC9.56□□□□□ -0.88
SMARCA4P51532 AC122688.1-201ENST00000541494 223 ntBASIC9.56□□□□□ -0.88
SMARCA4P51532 AC008033.2-201ENST00000542626 177 ntBASIC9.56□□□□□ -0.88
SMARCA4P51532 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC9.56□□□□□ -0.88
SMARCA4P51532 AC008814.1-201ENST00000603797 406 ntBASIC9.56□□□□□ -0.88
SMARCA4P51532 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC9.56□□□□□ -0.88
SMARCA4P51532 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMARCA4P51532 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SMARCA4P51532 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC9.56□□□□□ -0.88
SMARCA4P51532 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMARCA4P51532 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SMARCA4P51532 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC9.56□□□□□ -0.88
SMARCA4P51532 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC9.56□□□□□ -0.88
SMARCA4P51532 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SMARCA4P51532 MIR1182-201ENST00000408363 97 ntBASIC9.56□□□□□ -0.88
SMARCA4P51532 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC9.56□□□□□ -0.88
SMARCA4P51532 RPL7P11-201ENST00000437586 658 ntBASIC9.56□□□□□ -0.88
SMARCA4P51532 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC9.56□□□□□ -0.88
SMARCA4P51532 GCSHP4-201ENST00000538792 439 ntBASIC9.56□□□□□ -0.88
SMARCA4P51532 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC9.56□□□□□ -0.88
SMARCA4P51532 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC9.56□□□□□ -0.88
SMARCA4P51532 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC9.56□□□□□ -0.88
SMARCA4P51532 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC9.56□□□□□ -0.88
SMARCA4P51532 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
SMARCA4P51532 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC9.55□□□□□ -0.88
SMARCA4P51532 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
SMARCA4P51532 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
SMARCA4P51532 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SMARCA4P51532 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
SMARCA4P51532 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC9.55□□□□□ -0.88
SMARCA4P51532 RPL10P10-201ENST00000403509 664 ntBASIC9.55□□□□□ -0.88
SMARCA4P51532 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC9.55□□□□□ -0.88
SMARCA4P51532 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC9.55□□□□□ -0.88
SMARCA4P51532 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC9.55□□□□□ -0.88
SMARCA4P51532 XIST-210ENST00000602863 775 ntTSL 3 BASIC9.55□□□□□ -0.88
SMARCA4P51532 AP005131.7-201ENST00000610087 611 ntBASIC9.55□□□□□ -0.88
SMARCA4P51532 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SMARCA4P51532 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SMARCA4P51532 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
SMARCA4P51532 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
SMARCA4P51532 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
SMARCA4P51532 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SMARCA4P51532 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SMARCA4P51532 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SMARCA4P51532 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SMARCA4P51532 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SMARCA4P51532 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC9.54□□□□□ -0.88
SMARCA4P51532 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.54□□□□□ -0.88
SMARCA4P51532 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC9.54□□□□□ -0.88
SMARCA4P51532 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC9.54□□□□□ -0.88
SMARCA4P51532 UGP2-232ENST00000640075 567 ntTSL 5 BASIC9.54□□□□□ -0.88
SMARCA4P51532 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SMARCA4P51532 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SMARCA4P51532 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC9.54□□□□□ -0.88
SMARCA4P51532 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC9.54□□□□□ -0.88
SMARCA4P51532 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
SMARCA4P51532 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SMARCA4P51532 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SMARCA4P51532 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SMARCA4P51532 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC9.53□□□□□ -0.88
SMARCA4P51532 GJA6P-201ENST00000415117 1042 ntBASIC9.53□□□□□ -0.88
SMARCA4P51532 CHEK2P3-201ENST00000416118 248 ntBASIC9.53□□□□□ -0.88
SMARCA4P51532 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC9.53□□□□□ -0.88
SMARCA4P51532 RPL5P25-201ENST00000441148 775 ntBASIC9.53□□□□□ -0.88
SMARCA4P51532 NDUFA5P9-201ENST00000472609 340 ntBASIC9.53□□□□□ -0.88
SMARCA4P51532 RPL17P2-201ENST00000491913 451 ntBASIC9.53□□□□□ -0.88
SMARCA4P51532 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC9.53□□□□□ -0.88
SMARCA4P51532 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC9.53□□□□□ -0.88
SMARCA4P51532 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC9.53□□□□□ -0.88
SMARCA4P51532 AC104687.2-201ENST00000604442 342 ntBASIC9.53□□□□□ -0.88
SMARCA4P51532 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC9.53□□□□□ -0.88
SMARCA4P51532 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC9.53□□□□□ -0.88
SMARCA4P51532 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
SMARCA4P51532 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
SMARCA4P51532 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SMARCA4P51532 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
SMARCA4P51532 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
SMARCA4P51532 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SMARCA4P51532 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
SMARCA4P51532 RN7SKP100-201ENST00000411258 284 ntBASIC9.53□□□□□ -0.88
SMARCA4P51532 AC092570.3-201ENST00000420113 693 ntBASIC9.53□□□□□ -0.88
SMARCA4P51532 OR10T1P-201ENST00000424327 947 ntBASIC9.53□□□□□ -0.88
SMARCA4P51532 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC9.53□□□□□ -0.88
SMARCA4P51532 IGBP1P3-201ENST00000447449 1000 ntBASIC9.53□□□□□ -0.88
SMARCA4P51532 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC9.53□□□□□ -0.88
SMARCA4P51532 RN7SL385P-201ENST00000468873 276 ntBASIC9.53□□□□□ -0.88
SMARCA4P51532 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC9.53□□□□□ -0.88
SMARCA4P51532 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC9.53□□□□□ -0.88
SMARCA4P51532 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC9.53□□□□□ -0.88
SMARCA4P51532 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC9.52□□□□□ -0.88
SMARCA4P51532 AC140479.2-201ENST00000421567 3130 ntBASIC9.52□□□□□ -0.88
SMARCA4P51532 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMARCA4P51532 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMARCA4P51532 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SMARCA4P51532 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMARCA4P51532 AC009948.3-201ENST00000603415 1798 ntBASIC9.52□□□□□ -0.89
SMARCA4P51532 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SMARCA4P51532 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms