Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RPL7P56-201ENST00000429441 717 ntBASIC5.58□□□□□ -1.52
RPA3P35244 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.58□□□□□ -1.52
RPA3P35244 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.58□□□□□ -1.52
RPA3P35244 IGBP1P3-201ENST00000447449 1000 ntBASIC5.58□□□□□ -1.52
RPA3P35244 AL596266.1-201ENST00000448132 400 ntBASIC5.58□□□□□ -1.52
RPA3P35244 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.58□□□□□ -1.52
RPA3P35244 NENFP3-201ENST00000503735 313 ntBASIC5.58□□□□□ -1.52
RPA3P35244 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.58□□□□□ -1.52
RPA3P35244 SCARNA6.1-201ENST00000516989 238 ntBASIC5.58□□□□□ -1.52
RPA3P35244 AC092709.1-201ENST00000521355 1045 ntBASIC5.58□□□□□ -1.52
RPA3P35244 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.58□□□□□ -1.52
RPA3P35244 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.58□□□□□ -1.52
RPA3P35244 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.58□□□□□ -1.52
RPA3P35244 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.58□□□□□ -1.52
RPA3P35244 RN7SL290P-201ENST00000578661 300 ntBASIC5.58□□□□□ -1.52
RPA3P35244 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.58□□□□□ -1.52
RPA3P35244 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.58□□□□□ -1.52
RPA3P35244 RPL12P48-201ENST00000605620 304 ntBASIC5.58□□□□□ -1.52
RPA3P35244 AC008833.1-201ENST00000611633 691 ntBASIC5.58□□□□□ -1.52
RPA3P35244 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.58□□□□□ -1.52
RPA3P35244 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RPA3P35244 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RPA3P35244 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.58□□□□□ -1.52
RPA3P35244 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RPA3P35244 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RPA3P35244 AL034549.2-201ENST00000618285 3373 ntBASIC5.58□□□□□ -1.52
RPA3P35244 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RPA3P35244 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RPA3P35244 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RPA3P35244 AC106872.5-201ENST00000508856 1416 ntBASIC5.57□□□□□ -1.52
RPA3P35244 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
RPA3P35244 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
RPA3P35244 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RPA3P35244 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.57□□□□□ -1.52
RPA3P35244 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
RPA3P35244 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RPA3P35244 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.57□□□□□ -1.52
RPA3P35244 MIR375-201ENST00000362103 64 ntBASIC5.57□□□□□ -1.52
RPA3P35244 RNA5SP510-201ENST00000364697 99 ntBASIC5.57□□□□□ -1.52
RPA3P35244 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RPA3P35244 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RPA3P35244 PPIAP9-201ENST00000403866 498 ntBASIC5.57□□□□□ -1.52
RPA3P35244 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RPA3P35244 RPSAP35-201ENST00000413753 818 ntBASIC5.57□□□□□ -1.52
RPA3P35244 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.57□□□□□ -1.52
RPA3P35244 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.57□□□□□ -1.52
RPA3P35244 AC117394.1-201ENST00000477323 567 ntBASIC5.57□□□□□ -1.52
RPA3P35244 AC022215.1-201ENST00000481770 362 ntBASIC5.57□□□□□ -1.52
RPA3P35244 RN7SL570P-201ENST00000484405 292 ntBASIC5.57□□□□□ -1.52
RPA3P35244 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.57□□□□□ -1.52
RPA3P35244 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.57□□□□□ -1.52
RPA3P35244 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.57□□□□□ -1.52
RPA3P35244 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RPA3P35244 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.57□□□□□ -1.52
RPA3P35244 IGKV2-4-201ENST00000523070 340 ntBASIC5.57□□□□□ -1.52
RPA3P35244 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.57□□□□□ -1.52
RPA3P35244 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.57□□□□□ -1.52
RPA3P35244 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
RPA3P35244 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.57□□□□□ -1.52
RPA3P35244 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.57□□□□□ -1.52
RPA3P35244 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.57□□□□□ -1.52
RPA3P35244 AC100767.2-201ENST00000604840 693 ntBASIC5.57□□□□□ -1.52
RPA3P35244 AC090607.5-201ENST00000615692 224 ntBASIC5.57□□□□□ -1.52
RPA3P35244 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.57□□□□□ -1.52
RPA3P35244 AL360270.2-201ENST00000562952 5985 ntBASIC5.57□□□□□ -1.52
RPA3P35244 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RPA3P35244 AC100757.1-201ENST00000616872 1835 ntBASIC5.57□□□□□ -1.52
RPA3P35244 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.57□□□□□ -1.52
RPA3P35244 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RPA3P35244 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RPA3P35244 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RPA3P35244 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.57□□□□□ -1.52
RPA3P35244 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.56□□□□□ -1.52
RPA3P35244 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RPA3P35244 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RPA3P35244 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RPA3P35244 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RPA3P35244 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RPA3P35244 AC003973.3-201ENST00000624863 2822 ntBASIC5.56□□□□□ -1.52
RPA3P35244 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RPA3P35244 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
RPA3P35244 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.56□□□□□ -1.52
RPA3P35244 AL159987.1-201ENST00000347911 293 ntBASIC5.56□□□□□ -1.52
RPA3P35244 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RPA3P35244 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RPA3P35244 RPS6P23-201ENST00000413224 722 ntBASIC5.56□□□□□ -1.52
RPA3P35244 EEF1B2P8-201ENST00000414101 671 ntBASIC5.56□□□□□ -1.52
RPA3P35244 VN1R3-201ENST00000418822 919 ntBASIC5.56□□□□□ -1.52
RPA3P35244 TRGV5P-201ENST00000419915 354 ntBASIC5.56□□□□□ -1.52
RPA3P35244 AC092106.1-201ENST00000444291 373 ntBASIC5.56□□□□□ -1.52
RPA3P35244 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.56□□□□□ -1.52
RPA3P35244 OR52E3P-201ENST00000452083 936 ntBASIC5.56□□□□□ -1.52
RPA3P35244 AL445665.1-202ENST00000452436 324 ntBASIC5.56□□□□□ -1.52
RPA3P35244 AC084754.1-201ENST00000463466 464 ntBASIC5.56□□□□□ -1.52
RPA3P35244 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RPA3P35244 RPL32P33-201ENST00000487023 394 ntBASIC5.56□□□□□ -1.52
RPA3P35244 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.56□□□□□ -1.52
RPA3P35244 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.56□□□□□ -1.52
RPA3P35244 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.56□□□□□ -1.52
RPA3P35244 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms