Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 HMGN1P2-201ENST00000445197 310 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AL122020.1-201ENST00000472287 459 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 RN7SKP253-201ENST00000516424 309 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 TRIM77BP-201ENST00000524985 1119 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC091078.2-201ENST00000557145 559 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC127024.5-201ENST00000580085 462 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC091932.2-201ENST00000623014 291 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC129778.1-202ENST00000623812 261 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AL591379.1-207ENST00000635982 261 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.99□□□□□ -1.61
HLA-DPB1P04440 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DPB1P04440 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AL078621.3-201ENST00000623707 2042 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 MRPL53P1-201ENST00000414323 319 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AL138899.2-201ENST00000439139 499 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AC016772.1-201ENST00000444170 1261 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AL359839.1-201ENST00000451975 1160 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 PFN1P8-201ENST00000497012 543 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AC026782.2-201ENST00000510845 636 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 GAPDHP71-201ENST00000511530 1003 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 OR5AM1P-201ENST00000532136 1032 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AC010487.1-201ENST00000594408 1172 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 FO681491.1-202ENST00000623392 737 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 PDZK1P1-202ENST00000425209 1350 ntBASIC4.98□□□□□ -1.61
HLA-DPB1P04440 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPB1P04440 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AC018809.2-201ENST00000602436 3823 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 AC068870.1-201ENST00000563737 2455 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 GTF2IP4-201ENST00000453092 2054 ntBASIC4.97□□□□□ -1.61
HLA-DPB1P04440 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPB1P04440 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms