Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC005841.1-201ENST00000547042 287 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 ILF2P2-201ENST00000547482 1117 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC008014.1-201ENST00000551503 829 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC122134.1-201ENST00000565664 1104 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC011840.5-201ENST00000582125 771 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC119403.2-201ENST00000590960 598 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AL022324.3-201ENST00000609330 747 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC026368.1-201ENST00000614934 690 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 RFPL4AP6-201ENST00000616792 846 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 HLA-B-257ENST00000640094 147 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 SLC2A3P1-201ENST00000519666 1451 ntBASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC2.95□□□□□ -1.94
CHKB-CPT1BH3BT56 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RNU105B-201ENST00000364478 208 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RN7SKP78-201ENST00000364711 318 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 U3.14-201ENST00000365363 227 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 MRPS6P2-201ENST00000381143 370 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AL034417.1-201ENST00000399343 800 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AL603766.1-201ENST00000407763 664 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RNA5SP156-201ENST00000410250 110 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RN7SKP144-201ENST00000411108 279 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RPS15AP30-201ENST00000420976 390 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 EIF4EP1-201ENST00000422311 642 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC000089.1-201ENST00000424559 801 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL12P12-201ENST00000424633 501 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RPS26P4-201ENST00000431743 355 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC016772.1-201ENST00000444170 1261 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RBMY2TP-201ENST00000451162 947 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 SDC4P-201ENST00000453285 601 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 APOOP2-201ENST00000461561 539 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL23AP2-201ENST00000471227 466 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RN7SL643P-201ENST00000471845 291 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL38P3-201ENST00000484463 213 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC146944.2-203ENST00000502493 354 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC139495.1-202ENST00000513164 354 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 VTA1P2-201ENST00000520205 911 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 PMS2P3-207ENST00000529061 717 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 CCDC58P5-201ENST00000536923 432 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC135001.1-201ENST00000544546 283 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 GSTP1P1-201ENST00000548078 319 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL3P13-201ENST00000550415 216 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms