Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RPL12P39-201ENST00000455456 496 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 RPS23P2-201ENST00000463671 415 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 AC079315.1-201ENST00000602952 623 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 AC067773.1-201ENST00000603284 1094 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 HIRAP1-201ENST00000605318 787 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 FO681491.1-202ENST00000623392 737 ntBASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DRB4X5D2U9 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
HLA-DRB4X5D2U9 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 CXADRP1-201ENST00000398098 1095 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 OR7E156P-201ENST00000400303 464 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 RN7SKP240-201ENST00000410583 375 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AL357752.1-201ENST00000412817 349 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 PCBP2P1-201ENST00000437262 977 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 RN7SL570P-201ENST00000484405 292 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 PFN1P8-201ENST00000497012 543 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 TRIM77BP-201ENST00000524985 1119 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AL138895.2-201ENST00000603019 178 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AC090607.5-201ENST00000615692 224 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 CXADRP3-202ENST00000617265 1100 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 OR8G3P-202ENST00000641572 1255 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AC007842.1-201ENST00000597336 2039 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AC116158.1-201ENST00000560231 2129 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 AC008079.2-201ENST00000623543 20396 ntBASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DRB4X5D2U9 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 AC144833.1-201ENST00000567953 4089 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 TMSB4XP2-201ENST00000335179 210 ntBASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DRB4X5D2U9 SNORA70.6-201ENST00000383934 134 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms