Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHGA6Q9Y5G7 AC009779.8-201ENST00000641684 4384 ntBASIC6.23□□□□□ -1.41
PCDHGA6Q9Y5G7 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHGA6Q9Y5G7 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PCDHGA6Q9Y5G7 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.23□□□□□ -1.41
PCDHGA6Q9Y5G7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHGA6Q9Y5G7 AP003486.1-201ENST00000525716 3994 ntBASIC6.23□□□□□ -1.41
PCDHGA6Q9Y5G7 AC130360.2-201ENST00000533477 1556 ntBASIC6.23□□□□□ -1.41
PCDHGA6Q9Y5G7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDHGA6Q9Y5G7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AL033543.1-201ENST00000623440 13454 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 RNU6-1320P-201ENST00000390838 107 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 RNU6-1269P-201ENST00000391139 107 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 RNA5SP431-201ENST00000410312 120 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 VN1R20P-201ENST00000425215 966 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 NAP1L4P2-201ENST00000425958 899 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 GAPDHP59-201ENST00000435908 267 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AL591719.1-201ENST00000444669 744 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 RBMY2TP-201ENST00000451162 947 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC016724.1-201ENST00000453215 421 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AL358876.1-201ENST00000453364 1075 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 PSMC1P13-201ENST00000458195 985 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 RNU6-599P-201ENST00000459383 107 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 RNU6-1193P-201ENST00000459461 107 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC096992.1-201ENST00000459808 709 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC002519.2-203ENST00000567043 837 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 RN7SL622P-201ENST00000585292 275 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AP001357.1-201ENST00000586304 1053 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 MIR6071-201ENST00000616741 78 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 MIR6861-201ENST00000618657 64 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 RNU6-368P-201ENST00000620928 107 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 RNU6-538P-201ENST00000622329 107 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC139713.2-210ENST00000641741 992 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC005702.3-201ENST00000585345 1447 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 AC073365.1-203ENST00000641055 1992 ntBASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHGA6Q9Y5G7 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
PCDHGA6Q9Y5G7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.21□□□□□ -1.41
PCDHGA6Q9Y5G7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.41
PCDHGA6Q9Y5G7 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
PCDHGA6Q9Y5G7 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
PCDHGA6Q9Y5G7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCDHGA6Q9Y5G7 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.21□□□□□ -1.41
PCDHGA6Q9Y5G7 AL662795.2-201ENST00000624252 3706 ntBASIC6.21□□□□□ -1.41
PCDHGA6Q9Y5G7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms