Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC021755.1-201ENST00000559747 1447 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AL031651.1-201ENST00000615357 1438 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC090220.1-201ENST00000593078 1699 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 RAD1P1-201ENST00000231383 813 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC008171.1-201ENST00000395058 200 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 RNU6-648P-201ENST00000410190 107 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC098592.2-201ENST00000413158 265 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 UBE2V1P9-201ENST00000414760 368 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC130360.1-201ENST00000425489 1117 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 CFL1P4-201ENST00000451536 498 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC026348.1-201ENST00000462549 1053 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 LAMTOR3P2-201ENST00000504479 232 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC130365.2-201ENST00000525882 1201 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC092121.1-201ENST00000569452 202 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 RNA5SP440-201ENST00000612665 119 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC245014.3-201ENST00000618589 347 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC069234.4-201ENST00000621276 412 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AL132640.3-201ENST00000630473 177 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC073488.3-201ENST00000631611 778 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC083865.1-201ENST00000636634 831 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 AC008627.1-201ENST00000517511 1704 ntBASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDLIM7Q9NR12 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 NAMPTP1-201ENST00000440465 2514 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 SPATA31C1-201ENST00000420021 3895 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 NPM1P38-201ENST00000403835 865 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AL138880.1-201ENST00000405824 642 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 RN7SKP286-201ENST00000410894 299 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 RPL23AP18-201ENST00000416139 468 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AL121776.1-201ENST00000429337 372 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AL589823.1-201ENST00000429577 183 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 MTND2P40-201ENST00000436718 841 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 RPSAP39-201ENST00000467439 883 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC068522.1-201ENST00000482895 345 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC113420.1-201ENST00000507903 571 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC106800.3-201ENST00000511389 308 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 ATP5LP3-201ENST00000514223 304 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 OR4A17P-201ENST00000526032 904 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 RPA2P1-201ENST00000556557 721 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 NDUFAF4P1-201ENST00000559425 519 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms