Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ARFGAP2-205ENST00000524782 2976 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 STRADA-247ENST00000640679 1816 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ANKRD20A2-201ENST00000377601 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 SPDYE16-202ENST00000632547 3434 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF589-201ENST00000354698 3368 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 TM2D1-202ENST00000371177 3218 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 DNAJA2-201ENST00000317089 3122 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 PEX1-203ENST00000428214 3681 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 OR10H1-202ENST00000641419 4376 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 KIRREL1-201ENST00000359209 2874 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 CSE1L-202ENST00000396192 3459 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 LRRC37A7P-202ENST00000585232 1394 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 PARD3B-203ENST00000358768 3432 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 FCRL3-201ENST00000368184 4725 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 USO1-204ENST00000514213 4034 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 GOT2P1-201ENST00000440922 1309 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 GUCY1B2-204ENST00000531898 1979 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC073176.2-201ENST00000603033 1963 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 RCBTB2-201ENST00000344532 3232 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 L3MBTL3-204ENST00000526019 3243 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 COA3-201ENST00000328434 771 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 RNU105C-201ENST00000362342 209 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 SNORD115-30-201ENST00000364117 82 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 RNU1-133P-201ENST00000364867 167 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 RN7SKP188-201ENST00000410789 317 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AL512326.3-201ENST00000424885 171 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 GHRL-205ENST00000429122 793 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 PHKG1P4-201ENST00000430144 370 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC01039-201ENST00000437113 650 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 snoU13.6-201ENST00000458785 104 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 RN7SL743P-201ENST00000475032 298 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 RPL31P41-201ENST00000477967 372 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 RPL31P13-201ENST00000484151 370 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC114728.1-201ENST00000488289 483 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC091874.1-201ENST00000511402 339 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 ARAP3-205ENST00000513878 3810 ntTSL 2 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 SNORA70.11-201ENST00000515987 138 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 SNORA70.13-201ENST00000516116 138 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC008446.1-201ENST00000522454 451 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 DEFB131E-201ENST00000532329 154 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 PPCDC-210ENST00000568649 926 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC090386.1-201ENST00000588766 464 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AP002986.1-203ENST00000602310 330 ntTSL 3 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC005972.2-201ENST00000604690 348 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC131055.2-201ENST00000610586 248 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 RNF215-208ENST00000619645 555 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 NASP-225ENST00000629893 253 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 RHOXF1P3-202ENST00000639347 851 ntTSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF16-202ENST00000394909 2503 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC007998.4-201ENST00000612496 2533 ntBASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 SPIB-205ENST00000595883 3791 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRTAP3-3Q9BYR6 AC073957.3-201ENST00000609998 6758 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms