Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM11Q96F44 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM11Q96F44 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM11Q96F44 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 RPL17P50-201ENST00000396131 546 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AL139413.1-201ENST00000421309 217 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC093155.1-201ENST00000440164 826 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 Z99127.2-201ENST00000441426 334 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 MTATP6P30-201ENST00000443540 664 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC007677.1-201ENST00000445757 515 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 BX323845.2-201ENST00000458382 234 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM11Q96F44 RN7SL182P-201ENST00000496499 300 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 MTCO3P9-201ENST00000506989 781 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 STMN1P2-201ENST00000508435 439 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 NACAP5-201ENST00000509863 636 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC093770.1-201ENST00000511559 571 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 RNA5SP303-201ENST00000516192 130 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 Y_RNA.701-201ENST00000516812 110 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 MIR4789-201ENST00000577469 82 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 YWHAQP7-201ENST00000603536 658 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC020910.2-201ENST00000603635 610 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 BNIP3P9-201ENST00000603714 553 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC005377.1-201ENST00000605126 456 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC055764.2-201ENST00000610089 670 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC091304.9-201ENST00000612091 226 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC011472.4-201ENST00000615848 491 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AC034229.6-201ENST00000623704 224 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 OR7E161P-202ENST00000641994 1033 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM11Q96F44 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 AL356317.1-201ENST00000396110 1436 ntBASIC7.5□□□□□ -1.21
TRIM11Q96F44 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM11Q96F44 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM11Q96F44 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM11Q96F44 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.5□□□□□ -1.21
TRIM11Q96F44 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM11Q96F44 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM11Q96F44 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM11Q96F44 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
TRIM11Q96F44 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM11Q96F44 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.49□□□□□ -1.21
TRIM11Q96F44 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.49□□□□□ -1.21
TRIM11Q96F44 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM11Q96F44 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM11Q96F44 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.49□□□□□ -1.21
TRIM11Q96F44 AL359195.2-201ENST00000623657 4412 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.49□□□□□ -1.21
TRIM11Q96F44 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
TRIM11Q96F44 RNFT1P3-201ENST00000340898 1052 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 RNA5SP301-201ENST00000362537 121 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM11Q96F44 RNU6-259P-201ENST00000383999 107 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 U6.112-201ENST00000384129 70 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 MIR181A1-201ENST00000385026 110 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 OOSP1-201ENST00000398992 1270 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 RPL7P8-201ENST00000411964 730 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.49□□□□□ -1.21
TRIM11Q96F44 AC023141.1-201ENST00000419418 379 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
TRIM11Q96F44 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC7.49□□□□□ -1.21
TRIM11Q96F44 NPM1P22-201ENST00000427761 952 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.49□□□□□ -1.21
TRIM11Q96F44 AL590103.1-201ENST00000434488 307 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 SLC25A24P1-202ENST00000434803 1220 ntBASIC7.49□□□□□ -1.21
TRIM11Q96F44 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms