Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
TOPBP1Q92547 AC096921.1-201ENST00000411661 375 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 OR5M12P-201ENST00000423388 929 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC9□□□□□ -0.97
TOPBP1Q92547 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC9□□□□□ -0.97
TOPBP1Q92547 AC234781.3-201ENST00000452540 973 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 RPL23AP72-201ENST00000492447 435 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC9□□□□□ -0.97
TOPBP1Q92547 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC9□□□□□ -0.97
TOPBP1Q92547 AC137695.1-201ENST00000604126 489 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 AC012414.7-202ENST00000622705 1090 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC9□□□□□ -0.97
TOPBP1Q92547 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
TOPBP1Q92547 HSPD1P7-201ENST00000447985 1686 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC9□□□□□ -0.97
TOPBP1Q92547 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
TOPBP1Q92547 AP003175.1-201ENST00000641383 6658 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9□□□□□ -0.97
TOPBP1Q92547 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC9□□□□□ -0.97
TOPBP1Q92547 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC9□□□□□ -0.97
TOPBP1Q92547 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC9□□□□□ -0.97
TOPBP1Q92547 RPS4XP16-201ENST00000427198 791 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC9□□□□□ -0.97
TOPBP1Q92547 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC9□□□□□ -0.97
TOPBP1Q92547 IGBP1P5-201ENST00000507524 1000 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 AC109464.1-201ENST00000511091 819 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC9□□□□□ -0.97
TOPBP1Q92547 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC9□□□□□ -0.97
TOPBP1Q92547 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC9□□□□□ -0.97
TOPBP1Q92547 MTCO1P1-201ENST00000624263 1081 ntBASIC9□□□□□ -0.97
TOPBP1Q92547 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC9□□□□□ -0.97
TOPBP1Q92547 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
TOPBP1Q92547 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
TOPBP1Q92547 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TOPBP1Q92547 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
TOPBP1Q92547 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 AC007114.2-201ENST00000576014 4281 ntBASIC8.99□□□□□ -0.97
TOPBP1Q92547 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
TOPBP1Q92547 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 RPL18P10-201ENST00000425606 538 ntBASIC8.99□□□□□ -0.97
TOPBP1Q92547 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 RPL5P25-201ENST00000441148 775 ntBASIC8.99□□□□□ -0.97
TOPBP1Q92547 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 RSU1P1-201ENST00000453416 441 ntBASIC8.99□□□□□ -0.97
TOPBP1Q92547 AC034205.1-201ENST00000520621 638 ntBASIC8.99□□□□□ -0.97
TOPBP1Q92547 GCSHP4-201ENST00000538792 439 ntBASIC8.99□□□□□ -0.97
TOPBP1Q92547 OR11H3P-201ENST00000554547 982 ntBASIC8.99□□□□□ -0.97
TOPBP1Q92547 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 AC135068.5-201ENST00000624197 983 ntBASIC8.99□□□□□ -0.97
TOPBP1Q92547 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.99□□□□□ -0.97
TOPBP1Q92547 AC083899.1-201ENST00000454465 3819 ntBASIC8.98□□□□□ -0.97
TOPBP1Q92547 AC009962.1-201ENST00000567327 3813 ntBASIC8.98□□□□□ -0.97
TOPBP1Q92547 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 AP000866.6-201ENST00000638898 3579 ntBASIC8.98□□□□□ -0.97
TOPBP1Q92547 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.98□□□□□ -0.97
TOPBP1Q92547 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 SNORA70.2-201ENST00000364506 135 ntBASIC8.98□□□□□ -0.97
TOPBP1Q92547 RNA5SP428-201ENST00000365129 132 ntBASIC8.98□□□□□ -0.97
TOPBP1Q92547 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
TOPBP1Q92547 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC8.98□□□□□ -0.97
TOPBP1Q92547 CRIP1P1-201ENST00000427567 185 ntBASIC8.98□□□□□ -0.97
TOPBP1Q92547 RPL12P39-201ENST00000455456 496 ntBASIC8.98□□□□□ -0.97
TOPBP1Q92547 AC026979.1-201ENST00000492525 396 ntBASIC8.98□□□□□ -0.97
TOPBP1Q92547 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC8.98□□□□□ -0.97
TOPBP1Q92547 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC8.98□□□□□ -0.97
TOPBP1Q92547 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC8.98□□□□□ -0.97
TOPBP1Q92547 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
TOPBP1Q92547 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
TOPBP1Q92547 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
TOPBP1Q92547 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.98□□□□□ -0.97
TOPBP1Q92547 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TOPBP1Q92547 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
TOPBP1Q92547 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
TOPBP1Q92547 AC104447.1-201ENST00000624214 2124 ntBASIC8.97□□□□□ -0.97
TOPBP1Q92547 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TOPBP1Q92547 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
TOPBP1Q92547 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.97□□□□□ -0.97
TOPBP1Q92547 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
TOPBP1Q92547 AC114774.1-201ENST00000507410 1770 ntBASIC8.97□□□□□ -0.97
TOPBP1Q92547 FAM3C2-201ENST00000312214 681 ntBASIC8.97□□□□□ -0.97
TOPBP1Q92547 RPL10P10-201ENST00000403509 664 ntBASIC8.97□□□□□ -0.97
TOPBP1Q92547 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms