Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 BIN2P1-201ENST00000504996 1530 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 PABPC1P6-201ENST00000445594 1829 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 RNU6-152P-201ENST00000384037 107 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 NMD3P2-201ENST00000421815 761 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AL356806.1-201ENST00000422524 916 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 RNF19BPX-201ENST00000426224 625 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 RPS7P3-201ENST00000443360 580 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AL451063.1-201ENST00000450164 1133 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC093166.4-201ENST00000457867 318 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 RPS17P15-201ENST00000475609 349 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC022215.1-201ENST00000481770 362 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC004815.1-201ENST00000484185 331 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 EIF4A2P5-201ENST00000529914 499 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 HMGB1P42-201ENST00000532126 553 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 MIR3908-201ENST00000579798 126 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC021422.1-201ENST00000621212 473 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC011369.2-201ENST00000624423 1567 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC012078.1-201ENST00000405035 1646 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 CASC19-248ENST00000641674 1356 ntBASIC6.42□□□□□ -1.38
HERC6Q8IVU3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HERC6Q8IVU3 AC116158.1-201ENST00000560231 2129 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 RPL7P58-201ENST00000402913 758 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AMZ2P2-201ENST00000406819 1057 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 RNA5SP251-201ENST00000410614 137 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 Y_RNA.625-201ENST00000411256 107 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 FAR1P1-201ENST00000427163 934 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AL445928.1-201ENST00000435545 222 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 FMO7P-201ENST00000436045 768 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 H3F3BP1-201ENST00000440551 403 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 OTX2P1-201ENST00000450956 354 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AC073594.1-201ENST00000462065 364 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 STRADBP1-201ENST00000478954 1281 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 OR7E157P-201ENST00000494376 911 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AC024940.4-201ENST00000605507 246 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 AC116651.1-201ENST00000609724 556 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 MIR6748-201ENST00000610433 71 ntBASIC6.41□□□□□ -1.38
HERC6Q8IVU3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.41□□□□□ -1.38
HERC6Q8IVU3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms