Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 Z98755.1-201ENST00000407015 1384 ntBASIC7.28□□□□□ -1.24
COL16A1Q07092 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
COL16A1Q07092 AC005225.5-201ENST00000623547 2225 ntBASIC7.27□□□□□ -1.24
COL16A1Q07092 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.24
COL16A1Q07092 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL16A1Q07092 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL16A1Q07092 U3.3-201ENST00000362986 216 ntBASIC7.27□□□□□ -1.25
COL16A1Q07092 AC093414.1-201ENST00000434712 514 ntBASIC7.27□□□□□ -1.25
COL16A1Q07092 AC122718.1-201ENST00000439448 744 ntBASIC7.27□□□□□ -1.25
COL16A1Q07092 FAM133DP-201ENST00000464802 691 ntBASIC7.27□□□□□ -1.25
COL16A1Q07092 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.27□□□□□ -1.25
COL16A1Q07092 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.27□□□□□ -1.25
COL16A1Q07092 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
COL16A1Q07092 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL16A1Q07092 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.27□□□□□ -1.25
COL16A1Q07092 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.27□□□□□ -1.25
COL16A1Q07092 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.27□□□□□ -1.25
COL16A1Q07092 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL16A1Q07092 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.27□□□□□ -1.25
COL16A1Q07092 AC131649.2-201ENST00000624925 4439 ntBASIC7.27□□□□□ -1.25
COL16A1Q07092 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL16A1Q07092 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL16A1Q07092 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL16A1Q07092 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
COL16A1Q07092 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL16A1Q07092 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.27□□□□□ -1.25
COL16A1Q07092 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL16A1Q07092 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL16A1Q07092 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.27□□□□□ -1.25
COL16A1Q07092 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.27□□□□□ -1.25
COL16A1Q07092 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
COL16A1Q07092 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL16A1Q07092 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.27□□□□□ -1.25
COL16A1Q07092 AC112498.1-201ENST00000444401 332 ntBASIC7.27□□□□□ -1.25
COL16A1Q07092 KNOP1P3-201ENST00000446933 426 ntBASIC7.27□□□□□ -1.25
COL16A1Q07092 AC006967.1-201ENST00000467608 589 ntBASIC7.27□□□□□ -1.25
COL16A1Q07092 PMS2P3-207ENST00000529061 717 ntBASIC7.27□□□□□ -1.25
COL16A1Q07092 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.27□□□□□ -1.25
COL16A1Q07092 DHFRP1-201ENST00000579682 559 ntBASIC7.27□□□□□ -1.25
COL16A1Q07092 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC7.27□□□□□ -1.25
COL16A1Q07092 AC135068.12-201ENST00000637370 931 ntBASIC7.27□□□□□ -1.25
COL16A1Q07092 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
COL16A1Q07092 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.27□□□□□ -1.25
COL16A1Q07092 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.26□□□□□ -1.25
COL16A1Q07092 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.26□□□□□ -1.25
COL16A1Q07092 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.26□□□□□ -1.25
COL16A1Q07092 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.26□□□□□ -1.25
COL16A1Q07092 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 RNA5SP388-201ENST00000362584 119 ntBASIC7.26□□□□□ -1.25
COL16A1Q07092 AP002530.1-201ENST00000405705 684 ntBASIC7.26□□□□□ -1.25
COL16A1Q07092 AC083829.1-201ENST00000503756 657 ntBASIC7.26□□□□□ -1.25
COL16A1Q07092 YWHABP2-201ENST00000540201 713 ntBASIC7.26□□□□□ -1.25
COL16A1Q07092 MIR4277-201ENST00000578298 84 ntBASIC7.26□□□□□ -1.25
COL16A1Q07092 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC7.26□□□□□ -1.25
COL16A1Q07092 DLEU1_1.1-201ENST00000618107 190 ntBASIC7.26□□□□□ -1.25
COL16A1Q07092 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.26□□□□□ -1.25
COL16A1Q07092 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
COL16A1Q07092 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.26□□□□□ -1.25
COL16A1Q07092 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL16A1Q07092 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
COL16A1Q07092 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL16A1Q07092 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
COL16A1Q07092 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL16A1Q07092 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.25□□□□□ -1.25
COL16A1Q07092 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.25□□□□□ -1.25
COL16A1Q07092 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL16A1Q07092 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
COL16A1Q07092 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
COL16A1Q07092 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
COL16A1Q07092 DBIP1-201ENST00000401435 260 ntBASIC7.25□□□□□ -1.25
COL16A1Q07092 TMA16P2-201ENST00000413187 601 ntBASIC7.25□□□□□ -1.25
COL16A1Q07092 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.25□□□□□ -1.25
COL16A1Q07092 RPL7P11-201ENST00000437586 658 ntBASIC7.25□□□□□ -1.25
COL16A1Q07092 NANOGP9-201ENST00000439890 892 ntBASIC7.25□□□□□ -1.25
COL16A1Q07092 AL596266.1-201ENST00000448132 400 ntBASIC7.25□□□□□ -1.25
COL16A1Q07092 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC7.25□□□□□ -1.25
COL16A1Q07092 RPS7P6-201ENST00000485777 579 ntBASIC7.25□□□□□ -1.25
COL16A1Q07092 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC7.25□□□□□ -1.25
COL16A1Q07092 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.25□□□□□ -1.25
COL16A1Q07092 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC7.25□□□□□ -1.25
COL16A1Q07092 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.25□□□□□ -1.25
COL16A1Q07092 MIR92B-201ENST00000607575 96 ntBASIC7.25□□□□□ -1.25
COL16A1Q07092 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL16A1Q07092 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.25□□□□□ -1.25
COL16A1Q07092 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL16A1Q07092 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL16A1Q07092 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms