Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CX3CL1P78423 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 MIR133A2-201ENST00000347538 102 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 SNORA21-201ENST00000362423 132 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 RN7SKP171-201ENST00000364417 303 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 RNA5SP279-201ENST00000365513 117 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 RPL35AP31-201ENST00000418340 337 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC015977.1-201ENST00000418887 292 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 RPS26P13-201ENST00000419030 330 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 RPA2P2-201ENST00000419698 796 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AC013410.2-201ENST00000422627 201 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC130360.1-201ENST00000425489 1117 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AL354707.3-201ENST00000427308 331 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.85□□□□□ -1.63
CX3CL1P78423 PTP4A1P3-201ENST00000433661 420 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 CLNS1AP1-201ENST00000435954 682 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AL157827.1-201ENST00000447622 132 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 EEF1B2P3-201ENST00000447718 678 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 RPL23AP60-201ENST00000450011 454 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AP000547.1-201ENST00000454360 617 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AC092691.2-201ENST00000461787 803 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC005165.2-201ENST00000466070 380 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 RN7SL205P-201ENST00000490174 284 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 RN7SL284P-201ENST00000498823 275 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 MTCO2P9-201ENST00000503214 694 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AC016550.1-201ENST00000505348 785 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 TPM3P3-201ENST00000521343 354 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC130365.2-201ENST00000525882 1201 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CL1P78423 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 MIR3154-201ENST00000577829 84 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CX3CL1P78423 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CL1P78423 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CL1P78423 DNAJC19P3-201ENST00000594491 331 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC024933.1-201ENST00000608472 348 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC092681.3-201ENST00000609463 678 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AC004241.3-201ENST00000611728 517 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 MIR6889-201ENST00000613185 59 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 RFPL4AP6-201ENST00000616792 846 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC090617.9-201ENST00000623751 147 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 AC092451.3-201ENST00000625067 1343 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 PPBPP2-201ENST00000513150 1362 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CX3CL1P78423 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AL359715.4-201ENST00000606629 1436 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
CX3CL1P78423 HSPD1P7-201ENST00000447985 1686 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 AC022325.1-201ENST00000502748 2199 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.85□□□□□ -1.63
CX3CL1P78423 AL121768.1-201ENST00000613917 2544 ntBASIC4.85□□□□□ -1.63
CX3CL1P78423 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.85□□□□□ -1.63
CX3CL1P78423 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CX3CL1P78423 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms