Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LINC01963-201ENST00000562038 3148 ntBASIC5.42□□□□□ -1.54
SKP1P63208 AL031595.2-201ENST00000624215 19071 ntBASIC5.42□□□□□ -1.54
SKP1P63208 AC140134.1-201ENST00000511830 3544 ntBASIC5.42□□□□□ -1.54
SKP1P63208 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.42□□□□□ -1.54
SKP1P63208 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SKP1P63208 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SKP1P63208 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SKP1P63208 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SKP1P63208 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.42□□□□□ -1.54
SKP1P63208 GAPDHP42-201ENST00000406848 981 ntBASIC5.42□□□□□ -1.54
SKP1P63208 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.42□□□□□ -1.54
SKP1P63208 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.42□□□□□ -1.54
SKP1P63208 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.42□□□□□ -1.54
SKP1P63208 TMEM183AP1-205ENST00000432739 290 ntBASIC5.42□□□□□ -1.54
SKP1P63208 HMGB3P24-201ENST00000433260 622 ntBASIC5.42□□□□□ -1.54
SKP1P63208 SEPT7P3-201ENST00000455017 621 ntBASIC5.42□□□□□ -1.54
SKP1P63208 snoU13.29-201ENST00000459370 104 ntBASIC5.42□□□□□ -1.54
SKP1P63208 RN7SL72P-201ENST00000460697 269 ntBASIC5.42□□□□□ -1.54
SKP1P63208 ATP5LP5-201ENST00000483050 299 ntBASIC5.42□□□□□ -1.54
SKP1P63208 RPL32P33-201ENST00000487023 394 ntBASIC5.42□□□□□ -1.54
SKP1P63208 AC009120.1-201ENST00000493458 473 ntBASIC5.42□□□□□ -1.54
SKP1P63208 PSMA2P2-201ENST00000504319 686 ntBASIC5.42□□□□□ -1.54
SKP1P63208 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.42□□□□□ -1.54
SKP1P63208 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SKP1P63208 AC022826.1-201ENST00000519383 805 ntBASIC5.42□□□□□ -1.54
SKP1P63208 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SKP1P63208 AC084824.2-201ENST00000548906 345 ntBASIC5.42□□□□□ -1.54
SKP1P63208 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.42□□□□□ -1.54
SKP1P63208 NPM1P5-201ENST00000557228 838 ntBASIC5.42□□□□□ -1.54
SKP1P63208 AC096996.1-201ENST00000563813 325 ntBASIC5.42□□□□□ -1.54
SKP1P63208 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.42□□□□□ -1.54
SKP1P63208 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.42□□□□□ -1.54
SKP1P63208 AC010547.6-201ENST00000571789 193 ntBASIC5.42□□□□□ -1.54
SKP1P63208 AC060780.2-201ENST00000589047 198 ntBASIC5.42□□□□□ -1.54
SKP1P63208 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.42□□□□□ -1.54
SKP1P63208 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.42□□□□□ -1.54
SKP1P63208 AC127024.6-201ENST00000621598 424 ntBASIC5.42□□□□□ -1.54
SKP1P63208 AC007683.2-201ENST00000624681 714 ntBASIC5.42□□□□□ -1.54
SKP1P63208 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.42□□□□□ -1.54
SKP1P63208 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.42□□□□□ -1.54
SKP1P63208 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.42□□□□□ -1.54
SKP1P63208 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.42□□□□□ -1.54
SKP1P63208 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.42□□□□□ -1.54
SKP1P63208 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SKP1P63208 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.42□□□□□ -1.54
SKP1P63208 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
SKP1P63208 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 AL022311.1-201ENST00000623726 19416 ntBASIC5.41□□□□□ -1.54
SKP1P63208 AL359955.1-201ENST00000455242 3275 ntBASIC5.41□□□□□ -1.54
SKP1P63208 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.41□□□□□ -1.54
SKP1P63208 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
SKP1P63208 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.41□□□□□ -1.54
SKP1P63208 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SKP1P63208 RNA5SP46-201ENST00000362370 120 ntBASIC5.41□□□□□ -1.54
SKP1P63208 RNA5SP435-201ENST00000364044 108 ntBASIC5.41□□□□□ -1.54
SKP1P63208 MIR130A-201ENST00000385274 89 ntBASIC5.41□□□□□ -1.54
SKP1P63208 RNA5SP91-201ENST00000390902 119 ntBASIC5.41□□□□□ -1.54
SKP1P63208 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.41□□□□□ -1.54
SKP1P63208 HMGB1P20-201ENST00000402555 677 ntBASIC5.41□□□□□ -1.54
SKP1P63208 RMRPP5-201ENST00000411156 267 ntBASIC5.41□□□□□ -1.54
SKP1P63208 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.41□□□□□ -1.54
SKP1P63208 PRUNEP1-201ENST00000425846 705 ntBASIC5.41□□□□□ -1.54
SKP1P63208 AC127526.2-201ENST00000426436 775 ntBASIC5.41□□□□□ -1.54
SKP1P63208 AL450996.1-201ENST00000445574 1202 ntBASIC5.41□□□□□ -1.54
SKP1P63208 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.41□□□□□ -1.54
SKP1P63208 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.41□□□□□ -1.54
SKP1P63208 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.41□□□□□ -1.54
SKP1P63208 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.41□□□□□ -1.54
SKP1P63208 AC139365.2-201ENST00000517972 253 ntBASIC5.41□□□□□ -1.54
SKP1P63208 AC112191.2-201ENST00000522428 333 ntBASIC5.41□□□□□ -1.54
SKP1P63208 PMS2P3-207ENST00000529061 717 ntBASIC5.41□□□□□ -1.54
SKP1P63208 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.41□□□□□ -1.54
SKP1P63208 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.41□□□□□ -1.54
SKP1P63208 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.41□□□□□ -1.54
SKP1P63208 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.41□□□□□ -1.54
SKP1P63208 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
SKP1P63208 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 MFSD8-239ENST00000641590 2479 ntBASIC5.41□□□□□ -1.54
SKP1P63208 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SKP1P63208 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
SKP1P63208 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.41□□□□□ -1.54
SKP1P63208 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SKP1P63208 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.41□□□□□ -1.54
SKP1P63208 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.41□□□□□ -1.54
SKP1P63208 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.41□□□□□ -1.54
SKP1P63208 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.4□□□□□ -1.54
SKP1P63208 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms