Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 OR10AB1P-202ENST00000641219 1686 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN20P56880 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
CLDN20P56880 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN20P56880 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN20P56880 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CLDN20P56880 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN20P56880 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN20P56880 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN20P56880 SUGT1P2-201ENST00000379452 992 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 SEPT7P8-201ENST00000413308 775 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN20P56880 NMD3P2-201ENST00000421815 761 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AL731534.1-201ENST00000434711 269 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AC099670.2-201ENST00000435130 321 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN20P56880 VN1R48P-201ENST00000448149 1036 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN20P56880 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN20P56880 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN20P56880 MTND3P3-201ENST00000505004 126 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 PCNAP1-201ENST00000505363 709 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AC112206.4-201ENST00000515142 405 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 RNU6-319P-201ENST00000516025 108 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 Y_RNA.667-201ENST00000516212 107 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 RNA5SP438-201ENST00000516561 112 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN20P56880 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN20P56880 OR4V1P-201ENST00000525394 1140 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 OR8Q1P-201ENST00000526467 655 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AC092451.2-201ENST00000538746 658 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AC068305.2-201ENST00000550567 1205 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN20P56880 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN20P56880 AC005244.1-201ENST00000582566 339 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN20P56880 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN20P56880 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN20P56880 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN20P56880 AC098483.2-201ENST00000603158 454 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AL365181.4-201ENST00000609800 547 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AL021918.2-201ENST00000613415 194 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 MIR6861-201ENST00000618657 64 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AC253576.2-201ENST00000618815 580 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN20P56880 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN20P56880 AC022400.9-201ENST00000623633 273 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN20P56880 AC079776.5-201ENST00000641920 211 ntBASIC5.4□□□□□ -1.54
CLDN20P56880 AC016583.1-201ENST00000624221 2431 ntBASIC5.4□□□□□ -1.55
CLDN20P56880 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.4□□□□□ -1.55
CLDN20P56880 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN20P56880 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CLDN20P56880 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN20P56880 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.4□□□□□ -1.55
CLDN20P56880 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN20P56880 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN20P56880 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN20P56880 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN20P56880 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN20P56880 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN20P56880 GTF2IP4-201ENST00000453092 2054 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN20P56880 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN20P56880 AC012254.3-201ENST00000591183 2117 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 Z83820.1-201ENST00000456978 1499 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
CLDN20P56880 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN20P56880 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN20P56880 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CLDN20P56880 UGT2B24P-201ENST00000514441 1597 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN20P56880 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN20P56880 LYPLA1P3-201ENST00000402650 695 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN20P56880 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN20P56880 MTCO1P45-201ENST00000431457 267 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN20P56880 RPL5P25-201ENST00000441148 775 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
CLDN20P56880 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN20P56880 AC094085.1-201ENST00000468914 584 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN20P56880 AC124945.1-201ENST00000485133 188 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN20P56880 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN20P56880 AC106806.2-201ENST00000509365 500 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AC025768.1-201ENST00000510057 267 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AC114781.3-201ENST00000512083 142 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN20P56880 SCARNA18.1-201ENST00000516330 83 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AC060775.1-201ENST00000518241 520 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AC019227.1-201ENST00000526902 510 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 OR4A46P-201ENST00000527255 933 ntBASIC5.39□□□□□ -1.55
CLDN20P56880 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN20P56880 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN20P56880 NANOGNBP2-201ENST00000544753 553 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms