Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MGAT2P2-201ENST00000427194 797 ntBASIC5.6□□□□□ -1.51
MDH1P40925 NANOGP4-201ENST00000427230 913 ntBASIC5.6□□□□□ -1.51
MDH1P40925 HMGN1P32-201ENST00000441744 256 ntBASIC5.6□□□□□ -1.51
MDH1P40925 BMS1P10-201ENST00000443754 1120 ntBASIC5.6□□□□□ -1.51
MDH1P40925 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.6□□□□□ -1.51
MDH1P40925 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MDH1P40925 AL596266.1-201ENST00000448132 400 ntBASIC5.6□□□□□ -1.51
MDH1P40925 AL445466.1-201ENST00000448432 357 ntBASIC5.6□□□□□ -1.51
MDH1P40925 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.6□□□□□ -1.51
MDH1P40925 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.6□□□□□ -1.51
MDH1P40925 RN7SL269P-201ENST00000467795 305 ntBASIC5.6□□□□□ -1.51
MDH1P40925 RN7SL83P-201ENST00000468131 297 ntBASIC5.6□□□□□ -1.51
MDH1P40925 AL133372.1-201ENST00000493565 745 ntBASIC5.6□□□□□ -1.51
MDH1P40925 AGGF1P3-201ENST00000493675 1213 ntBASIC5.6□□□□□ -1.51
MDH1P40925 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.6□□□□□ -1.51
MDH1P40925 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.6□□□□□ -1.51
MDH1P40925 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MDH1P40925 AC074255.1-201ENST00000511259 501 ntBASIC5.6□□□□□ -1.51
MDH1P40925 HMGN1P9-201ENST00000515212 298 ntBASIC5.6□□□□□ -1.51
MDH1P40925 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.6□□□□□ -1.51
MDH1P40925 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.6□□□□□ -1.51
MDH1P40925 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MDH1P40925 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.6□□□□□ -1.51
MDH1P40925 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.6□□□□□ -1.51
MDH1P40925 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.6□□□□□ -1.51
MDH1P40925 AC096996.1-201ENST00000563813 325 ntBASIC5.6□□□□□ -1.51
MDH1P40925 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.6□□□□□ -1.51
MDH1P40925 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MDH1P40925 MIR3157-201ENST00000578688 85 ntBASIC5.6□□□□□ -1.51
MDH1P40925 AP005136.2-201ENST00000583253 1049 ntBASIC5.6□□□□□ -1.51
MDH1P40925 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.6□□□□□ -1.51
MDH1P40925 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.6□□□□□ -1.51
MDH1P40925 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.6□□□□□ -1.51
MDH1P40925 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.6□□□□□ -1.51
MDH1P40925 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
MDH1P40925 AC091059.2-201ENST00000623355 614 ntBASIC5.6□□□□□ -1.51
MDH1P40925 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MDH1P40925 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
MDH1P40925 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.6□□□□□ -1.51
MDH1P40925 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
MDH1P40925 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
MDH1P40925 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
MDH1P40925 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MDH1P40925 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
MDH1P40925 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
MDH1P40925 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MDH1P40925 AP001642.1-201ENST00000624727 2117 ntBASIC5.59□□□□□ -1.51
MDH1P40925 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MDH1P40925 RNU1-134P-201ENST00000362935 165 ntBASIC5.59□□□□□ -1.51
MDH1P40925 RNA5SP85-201ENST00000365378 119 ntBASIC5.59□□□□□ -1.51
MDH1P40925 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
MDH1P40925 SNORD56.6-201ENST00000384569 71 ntBASIC5.59□□□□□ -1.51
MDH1P40925 SNORD94-201ENST00000386037 137 ntBASIC5.59□□□□□ -1.51
MDH1P40925 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.59□□□□□ -1.51
MDH1P40925 SEPT7P8-201ENST00000413308 775 ntBASIC5.59□□□□□ -1.51
MDH1P40925 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.59□□□□□ -1.51
MDH1P40925 NIFKP3-201ENST00000417799 865 ntBASIC5.59□□□□□ -1.51
MDH1P40925 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.59□□□□□ -1.51
MDH1P40925 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MDH1P40925 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.59□□□□□ -1.51
MDH1P40925 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.59□□□□□ -1.51
MDH1P40925 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.59□□□□□ -1.51
MDH1P40925 RPL34P6-201ENST00000432390 345 ntBASIC5.59□□□□□ -1.51
MDH1P40925 GTF3AP5-201ENST00000442645 697 ntBASIC5.59□□□□□ -1.51
MDH1P40925 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.59□□□□□ -1.51
MDH1P40925 RPL31P11-202ENST00000454082 372 ntBASIC5.59□□□□□ -1.51
MDH1P40925 RN7SL790P-201ENST00000474043 298 ntBASIC5.59□□□□□ -1.51
MDH1P40925 RN7SL273P-201ENST00000481561 299 ntBASIC5.59□□□□□ -1.51
MDH1P40925 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.59□□□□□ -1.51
MDH1P40925 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
MDH1P40925 AC018639.1-201ENST00000492994 442 ntBASIC5.59□□□□□ -1.51
MDH1P40925 AC093325.1-201ENST00000508378 326 ntBASIC5.59□□□□□ -1.51
MDH1P40925 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.59□□□□□ -1.51
MDH1P40925 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.59□□□□□ -1.51
MDH1P40925 AP001804.2-201ENST00000533932 910 ntBASIC5.59□□□□□ -1.51
MDH1P40925 AL121839.1-201ENST00000556233 1185 ntBASIC5.59□□□□□ -1.51
MDH1P40925 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.59□□□□□ -1.51
MDH1P40925 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
MDH1P40925 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.59□□□□□ -1.51
MDH1P40925 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MDH1P40925 AC036176.3-201ENST00000602456 418 ntBASIC5.59□□□□□ -1.51
MDH1P40925 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.59□□□□□ -1.51
MDH1P40925 AC067838.1-201ENST00000606064 577 ntBASIC5.59□□□□□ -1.51
MDH1P40925 MIR6883-201ENST00000614952 78 ntBASIC5.59□□□□□ -1.51
MDH1P40925 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.59□□□□□ -1.51
MDH1P40925 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
MDH1P40925 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.59□□□□□ -1.51
MDH1P40925 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
MDH1P40925 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MDH1P40925 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
MDH1P40925 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MDH1P40925 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
MDH1P40925 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
MDH1P40925 AC112198.2-201ENST00000426589 6996 ntBASIC5.59□□□□□ -1.52
MDH1P40925 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
MDH1P40925 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.58□□□□□ -1.52
MDH1P40925 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
MDH1P40925 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MDH1P40925 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.58□□□□□ -1.52
MDH1P40925 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 344.7 ms