Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL645568.2-201ENST00000432815 1337 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNGA1P29973 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNGA1P29973 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CNGA1P29973 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CNGA1P29973 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.09□□□□□ -1.27
CNGA1P29973 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.09□□□□□ -1.27
CNGA1P29973 AL513325.1-201ENST00000417716 1034 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.09□□□□□ -1.27
CNGA1P29973 RPS7P14-201ENST00000426405 583 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 AC013262.1-201ENST00000426710 252 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.09□□□□□ -1.27
CNGA1P29973 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.09□□□□□ -1.27
CNGA1P29973 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.09□□□□□ -1.27
CNGA1P29973 AC023141.9-201ENST00000458734 412 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 AC008379.1-201ENST00000463655 464 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.09□□□□□ -1.27
CNGA1P29973 PPM1AP1-201ENST00000502740 1135 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.09□□□□□ -1.27
CNGA1P29973 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC7.09□□□□□ -1.27
CNGA1P29973 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.09□□□□□ -1.27
CNGA1P29973 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.09□□□□□ -1.27
CNGA1P29973 RNA5SP434-201ENST00000516647 121 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC7.09□□□□□ -1.27
CNGA1P29973 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC7.09□□□□□ -1.27
CNGA1P29973 AC084337.1-201ENST00000524809 686 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.09□□□□□ -1.27
CNGA1P29973 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.09□□□□□ -1.27
CNGA1P29973 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC7.09□□□□□ -1.27
CNGA1P29973 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CNGA1P29973 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.09□□□□□ -1.27
CNGA1P29973 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.09□□□□□ -1.27
CNGA1P29973 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
CNGA1P29973 AC108673.3-201ENST00000609183 335 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 RN7SL787P-201ENST00000613000 284 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 AL050303.3-201ENST00000613704 284 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 AC093875.1-201ENST00000623688 504 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.09□□□□□ -1.27
CNGA1P29973 AC073488.3-201ENST00000631611 778 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.09□□□□□ -1.27
CNGA1P29973 PSG10P-201ENST00000501199 1500 ntBASIC7.09□□□□□ -1.27
CNGA1P29973 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CNGA1P29973 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNGA1P29973 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNGA1P29973 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNGA1P29973 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNGA1P29973 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.09□□□□□ -1.27
CNGA1P29973 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CNGA1P29973 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CNGA1P29973 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CNGA1P29973 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CNGA1P29973 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CNGA1P29973 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CNGA1P29973 RNA5SP514-201ENST00000363717 111 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 AL050335.1-201ENST00000396909 869 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 RNA5SP156-201ENST00000410250 110 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 RN7SKP278-201ENST00000410504 342 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CNGA1P29973 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.08□□□□□ -1.28
CNGA1P29973 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.08□□□□□ -1.28
CNGA1P29973 AC006065.1-201ENST00000422539 802 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 AC093084.1-201ENST00000424233 687 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 CLUHP1-201ENST00000435012 1190 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.08□□□□□ -1.28
CNGA1P29973 OR3D1P-201ENST00000438288 955 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 RPL7P33-201ENST00000444159 742 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC7.08□□□□□ -1.28
CNGA1P29973 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.08□□□□□ -1.28
CNGA1P29973 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 AP006222.1-205ENST00000450734 457 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 YWHAEP1-201ENST00000453697 763 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 VPS25P1-201ENST00000455691 508 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 AC002075.1-201ENST00000457396 676 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 AC116562.1-201ENST00000485355 781 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 OR11I1P-201ENST00000486033 954 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 AC091965.3-201ENST00000506236 208 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 AC010460.2-201ENST00000509054 677 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC7.08□□□□□ -1.28
CNGA1P29973 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.08□□□□□ -1.28
CNGA1P29973 AC090236.2-201ENST00000587933 1101 ntBASIC7.08□□□□□ -1.28
CNGA1P29973 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.08□□□□□ -1.28
CNGA1P29973 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.08□□□□□ -1.28
CNGA1P29973 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.08□□□□□ -1.28
CNGA1P29973 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.08□□□□□ -1.28
CNGA1P29973 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CNGA1P29973 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CNGA1P29973 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CNGA1P29973 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms