Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 RPL12P49-201ENST00000441100 121 ntBASIC5.89□□□□□ -1.47
CD40P25942 AL031681.1-201ENST00000443304 400 ntBASIC5.89□□□□□ -1.47
CD40P25942 SNRPBP1-201ENST00000443634 282 ntBASIC5.89□□□□□ -1.47
CD40P25942 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 RPL21P134-201ENST00000453468 483 ntBASIC5.89□□□□□ -1.47
CD40P25942 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.89□□□□□ -1.47
CD40P25942 AC117395.1-201ENST00000487390 403 ntBASIC5.89□□□□□ -1.47
CD40P25942 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 AC026826.1-201ENST00000493002 361 ntBASIC5.89□□□□□ -1.47
CD40P25942 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 PABPC1P1-201ENST00000506347 591 ntBASIC5.89□□□□□ -1.47
CD40P25942 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 RNU6-416P-201ENST00000516265 103 ntBASIC5.89□□□□□ -1.47
CD40P25942 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 IGKV2D-10-201ENST00000520194 281 ntBASIC5.89□□□□□ -1.47
CD40P25942 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 AP003033.1-201ENST00000527244 415 ntBASIC5.89□□□□□ -1.47
CD40P25942 AP006587.5-201ENST00000532033 739 ntBASIC5.89□□□□□ -1.47
CD40P25942 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 AC140063.1-201ENST00000541343 259 ntBASIC5.89□□□□□ -1.47
CD40P25942 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
CD40P25942 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.89□□□□□ -1.47
CD40P25942 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.89□□□□□ -1.47
CD40P25942 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.89□□□□□ -1.47
CD40P25942 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 AC006539.2-201ENST00000601729 572 ntBASIC5.89□□□□□ -1.47
CD40P25942 AL590229.1-201ENST00000603497 542 ntBASIC5.89□□□□□ -1.47
CD40P25942 AL390877.1-201ENST00000605704 214 ntBASIC5.89□□□□□ -1.47
CD40P25942 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC5.89□□□□□ -1.47
CD40P25942 MIR6503-201ENST00000622884 86 ntBASIC5.89□□□□□ -1.47
CD40P25942 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 AC006328.2-201ENST00000623198 397 ntBASIC5.89□□□□□ -1.47
CD40P25942 AC012005.2-201ENST00000624333 397 ntBASIC5.89□□□□□ -1.47
CD40P25942 MIR4278-201ENST00000636094 69 ntBASIC5.89□□□□□ -1.47
CD40P25942 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 AC010132.4-201ENST00000569883 1368 ntBASIC5.89□□□□□ -1.47
CD40P25942 AP000526.1-201ENST00000603308 1388 ntBASIC5.89□□□□□ -1.47
CD40P25942 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 CASC19-260ENST00000641828 2001 ntBASIC5.89□□□□□ -1.47
CD40P25942 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.89□□□□□ -1.47
CD40P25942 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 ECM1P2-201ENST00000503354 1577 ntBASIC5.89□□□□□ -1.47
CD40P25942 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CD40P25942 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
CD40P25942 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CD40P25942 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CD40P25942 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CD40P25942 AL359922.2-201ENST00000581788 3017 ntBASIC5.88□□□□□ -1.47
CD40P25942 LARS-212ENST00000510191 3737 ntTSL 2 BASIC5.88□□□□□ -1.47
CD40P25942 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CD40P25942 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CD40P25942 DYNC1I2P1-201ENST00000435916 1838 ntBASIC5.88□□□□□ -1.47
CD40P25942 AC010401.2-201ENST00000575137 4934 ntBASIC5.88□□□□□ -1.47
CD40P25942 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CD40P25942 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CD40P25942 AC105749.1-201ENST00000631338 2008 ntBASIC5.88□□□□□ -1.47
CD40P25942 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CD40P25942 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CD40P25942 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CD40P25942 Y_RNA.51-201ENST00000362725 102 ntBASIC5.88□□□□□ -1.47
CD40P25942 RNU6-553P-201ENST00000364047 96 ntBASIC5.88□□□□□ -1.47
CD40P25942 ERMN-202ENST00000409216 746 ntTSL 4 BASIC5.88□□□□□ -1.47
CD40P25942 NRBF2P2-201ENST00000413087 861 ntBASIC5.88□□□□□ -1.47
CD40P25942 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.88□□□□□ -1.47
CD40P25942 TIMM9P2-201ENST00000419324 266 ntBASIC5.88□□□□□ -1.47
CD40P25942 AC009500.1-201ENST00000420684 583 ntBASIC5.88□□□□□ -1.47
CD40P25942 AC007435.1-201ENST00000421086 415 ntBASIC5.88□□□□□ -1.47
CD40P25942 FAM183DP-201ENST00000421987 399 ntBASIC5.88□□□□□ -1.47
CD40P25942 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms