Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 HMGN2P36-201ENST00000529541 409 ntBASIC4.87□□□□□ -1.63
ATF1P18846 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.87□□□□□ -1.63
ATF1P18846 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.87□□□□□ -1.63
ATF1P18846 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.87□□□□□ -1.63
ATF1P18846 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
ATF1P18846 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.87□□□□□ -1.63
ATF1P18846 AC106730.2-201ENST00000566641 540 ntBASIC4.87□□□□□ -1.63
ATF1P18846 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.87□□□□□ -1.63
ATF1P18846 AL356608.1-201ENST00000610034 820 ntBASIC4.87□□□□□ -1.63
ATF1P18846 AP001052.1-201ENST00000626421 99 ntBASIC4.87□□□□□ -1.63
ATF1P18846 AL034549.2-201ENST00000618285 3373 ntBASIC4.87□□□□□ -1.63
ATF1P18846 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATF1P18846 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.87□□□□□ -1.63
ATF1P18846 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.87□□□□□ -1.63
ATF1P18846 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATF1P18846 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATF1P18846 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATF1P18846 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.87□□□□□ -1.63
ATF1P18846 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.87□□□□□ -1.63
ATF1P18846 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATF1P18846 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF1P18846 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
ATF1P18846 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ATF1P18846 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF1P18846 AC006484.1-201ENST00000435086 1884 ntBASIC4.86□□□□□ -1.63
ATF1P18846 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF1P18846 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.86□□□□□ -1.63
ATF1P18846 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 AL159987.1-201ENST00000347911 293 ntBASIC4.86□□□□□ -1.63
ATF1P18846 RN7SKP171-201ENST00000364417 303 ntBASIC4.86□□□□□ -1.63
ATF1P18846 RNA5SP500-201ENST00000364486 119 ntBASIC4.86□□□□□ -1.63
ATF1P18846 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 PPIAP9-201ENST00000403866 498 ntBASIC4.86□□□□□ -1.63
ATF1P18846 RIMKLBP2-201ENST00000424737 654 ntBASIC4.86□□□□□ -1.63
ATF1P18846 RPL7P56-201ENST00000429441 717 ntBASIC4.86□□□□□ -1.63
ATF1P18846 TCEA1P3-201ENST00000443005 880 ntBASIC4.86□□□□□ -1.63
ATF1P18846 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF1P18846 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 IGBP1P3-201ENST00000447449 1000 ntBASIC4.86□□□□□ -1.63
ATF1P18846 EEF1B2P3-201ENST00000447718 678 ntBASIC4.86□□□□□ -1.63
ATF1P18846 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF1P18846 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF1P18846 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF1P18846 RPL12P24-201ENST00000474907 486 ntBASIC4.86□□□□□ -1.63
ATF1P18846 ENPP7P11-201ENST00000505915 627 ntBASIC4.86□□□□□ -1.63
ATF1P18846 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF1P18846 AC098976.1-201ENST00000513014 541 ntBASIC4.86□□□□□ -1.63
ATF1P18846 RNU6-1334P-201ENST00000516032 105 ntBASIC4.86□□□□□ -1.63
ATF1P18846 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF1P18846 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF1P18846 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF1P18846 PMS2P3-207ENST00000529061 717 ntBASIC4.86□□□□□ -1.63
ATF1P18846 AC084121.1-201ENST00000533882 835 ntBASIC4.86□□□□□ -1.63
ATF1P18846 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF1P18846 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.86□□□□□ -1.63
ATF1P18846 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF1P18846 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF1P18846 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF1P18846 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.86□□□□□ -1.63
ATF1P18846 AC108738.1-201ENST00000603703 237 ntBASIC4.86□□□□□ -1.63
ATF1P18846 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.86□□□□□ -1.63
ATF1P18846 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
ATF1P18846 LYARP1-201ENST00000436977 1501 ntBASIC4.86□□□□□ -1.63
ATF1P18846 AC090181.3-201ENST00000624777 1514 ntBASIC4.86□□□□□ -1.63
ATF1P18846 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.86□□□□□ -1.63
ATF1P18846 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
ATF1P18846 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.86□□□□□ -1.63
ATF1P18846 OR4G1P-202ENST00000641173 1788 ntBASIC4.86□□□□□ -1.63
ATF1P18846 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATF1P18846 AC100757.1-201ENST00000616872 1835 ntBASIC4.86□□□□□ -1.63
ATF1P18846 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.86□□□□□ -1.63
ATF1P18846 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATF1P18846 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ATF1P18846 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATF1P18846 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF1P18846 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF1P18846 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
ATF1P18846 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF1P18846 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATF1P18846 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF1P18846 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF1P18846 OR9K1P-201ENST00000326513 941 ntBASIC4.85□□□□□ -1.63
ATF1P18846 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.85□□□□□ -1.63
ATF1P18846 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.85□□□□□ -1.63
ATF1P18846 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF1P18846 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
ATF1P18846 SEPT7P2-202ENST00000398921 823 ntBASIC4.85□□□□□ -1.63
ATF1P18846 MIR1275-201ENST00000408770 80 ntBASIC4.85□□□□□ -1.63
ATF1P18846 AL121878.1-201ENST00000418638 859 ntBASIC4.85□□□□□ -1.63
ATF1P18846 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.85□□□□□ -1.63
ATF1P18846 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATF1P18846 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms