Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC8.12□□□□□ -1.11
SMPD1P17405 AC018644.1-201ENST00000429934 551 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 ACTR3P2-201ENST00000439585 1257 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 AL512593.1-201ENST00000444758 779 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 RPL31P15-201ENST00000449770 338 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC8.12□□□□□ -1.11
SMPD1P17405 AL513533.1-201ENST00000453728 415 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC8.12□□□□□ -1.11
SMPD1P17405 AC010878.1-201ENST00000456500 1047 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC8.12□□□□□ -1.11
SMPD1P17405 AC117395.2-201ENST00000463122 1128 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 RN7SL350P-201ENST00000492591 299 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.12□□□□□ -1.11
SMPD1P17405 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SMPD1P17405 AC009646.1-201ENST00000510455 318 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC8.12□□□□□ -1.11
SMPD1P17405 AC017037.2-201ENST00000513850 890 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 RN7SKP233-201ENST00000517005 110 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC8.12□□□□□ -1.11
SMPD1P17405 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.12□□□□□ -1.11
SMPD1P17405 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SMPD1P17405 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.12□□□□□ -1.11
SMPD1P17405 AC069240.2-201ENST00000550242 609 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 AC078814.3-201ENST00000553036 491 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.12□□□□□ -1.11
SMPD1P17405 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.12□□□□□ -1.11
SMPD1P17405 EEF1B2P1-201ENST00000567221 672 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 AC040162.2-201ENST00000573092 157 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 BNIP3P8-201ENST00000597863 560 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 AC136443.5-201ENST00000603741 370 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SMPD1P17405 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.12□□□□□ -1.11
SMPD1P17405 MIR6885-201ENST00000612241 66 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 AL161420.1-201ENST00000619393 264 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SMPD1P17405 YWHAEP7-203ENST00000622054 312 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.12□□□□□ -1.11
SMPD1P17405 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SMPD1P17405 AL080317.3-201ENST00000607434 4315 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SMPD1P17405 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.12□□□□□ -1.11
SMPD1P17405 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SMPD1P17405 AL391261.1-201ENST00000555712 1479 ntBASIC8.12□□□□□ -1.11
SMPD1P17405 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SMPD1P17405 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SMPD1P17405 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
SMPD1P17405 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
SMPD1P17405 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.11□□□□□ -1.11
SMPD1P17405 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.11□□□□□ -1.11
SMPD1P17405 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 AC245505.2-201ENST00000553572 3055 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 OR5P1P-201ENST00000299512 925 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 RN7SKP55-201ENST00000364888 307 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC8.11□□□□□ -1.11
SMPD1P17405 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
SMPD1P17405 CALM2P3-201ENST00000400429 449 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AL391422.1-201ENST00000402155 436 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AP000357.1-201ENST00000409926 1165 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 RPS26P38-201ENST00000414476 348 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 HMGB3P23-201ENST00000414981 585 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.11□□□□□ -1.11
SMPD1P17405 RPL18AP14-201ENST00000417685 526 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.11□□□□□ -1.11
SMPD1P17405 AL035410.1-201ENST00000427409 427 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC8.11□□□□□ -1.11
SMPD1P17405 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.11□□□□□ -1.11
SMPD1P17405 BX679664.2-201ENST00000439282 283 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.11□□□□□ -1.11
SMPD1P17405 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SMPD1P17405 CST12P-201ENST00000457644 362 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 SULT1D1P-201ENST00000458020 882 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AC040975.1-201ENST00000472104 316 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 RN7SL751P-201ENST00000473281 284 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AL591122.1-201ENST00000487348 492 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 MTCO2P4-201ENST00000517968 247 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.11□□□□□ -1.11
SMPD1P17405 MTND1P35-201ENST00000526739 508 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 BTG1P1-201ENST00000540396 508 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 NACA-211ENST00000548563 827 ntTSL 5 BASIC8.11□□□□□ -1.11
SMPD1P17405 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC8.11□□□□□ -1.11
SMPD1P17405 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC8.11□□□□□ -1.11
SMPD1P17405 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC8.11□□□□□ -1.11
SMPD1P17405 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.11□□□□□ -1.11
SMPD1P17405 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC8.11□□□□□ -1.11
SMPD1P17405 AC009220.3-201ENST00000604318 586 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AC027807.2-201ENST00000616099 408 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 MIR6849-201ENST00000618543 69 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 AC008626.2-201ENST00000624425 248 ntBASIC8.11□□□□□ -1.11
SMPD1P17405 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC8.11□□□□□ -1.11
SMPD1P17405 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms