Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL6A2P12110 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL6A2P12110 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.47□□□□□ -1.37
COL6A2P12110 NAMPTP1-201ENST00000440465 2514 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL6A2P12110 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC005261.4-201ENST00000600047 1385 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL6A2P12110 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC140479.2-201ENST00000421567 3130 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL6A2P12110 AC003985.2-201ENST00000562268 1669 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL6A2P12110 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 AC019178.1-201ENST00000392337 440 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 MCTS2P-201ENST00000394552 546 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC233289.1-201ENST00000403700 508 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL6A2P12110 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.47□□□□□ -1.37
COL6A2P12110 RN7SKP30-201ENST00000411373 334 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 AC116036.1-201ENST00000412199 367 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.47□□□□□ -1.37
COL6A2P12110 USP9YP26-201ENST00000421008 661 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 AL365203.2-201ENST00000423444 196 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 RPS4XP16-201ENST00000427198 791 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.47□□□□□ -1.37
COL6A2P12110 AL445567.1-201ENST00000439121 144 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC118469.1-201ENST00000442943 488 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 CASP3P1-201ENST00000446037 609 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC244505.3-201ENST00000454598 187 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 AC236972.4-201ENST00000458091 963 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 RPL31P3-201ENST00000458430 332 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 RPS4XP19-201ENST00000460237 736 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 CBX5P1-201ENST00000468470 561 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 RN7SL165P-201ENST00000477476 291 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 RN7SL849P-201ENST00000485236 295 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 RPL21P42-201ENST00000488408 464 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC093890.1-201ENST00000502554 540 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.47□□□□□ -1.37
COL6A2P12110 AL117351.2-201ENST00000513571 157 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC138938.1-201ENST00000515431 782 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL6A2P12110 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC007068.2-201ENST00000543168 395 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 AC090115.2-201ENST00000548060 883 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.47□□□□□ -1.37
COL6A2P12110 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC090888.1-201ENST00000561335 1141 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 MIR378C-201ENST00000578683 81 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 AC233702.7-202ENST00000582941 211 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 MIR3159-201ENST00000584572 74 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.47□□□□□ -1.37
COL6A2P12110 NDUFB9P1-201ENST00000604683 510 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 AL445423.1-201ENST00000609941 536 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
COL6A2P12110 AC092608.3-201ENST00000625017 386 ntBASIC6.47□□□□□ -1.37
COL6A2P12110 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.47□□□□□ -1.37
COL6A2P12110 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.47□□□□□ -1.37
COL6A2P12110 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL6A2P12110 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.47□□□□□ -1.37
COL6A2P12110 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL6A2P12110 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL6A2P12110 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
COL6A2P12110 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL6A2P12110 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL6A2P12110 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL6A2P12110 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
COL6A2P12110 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL6A2P12110 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL6A2P12110 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL6A2P12110 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COL6A2P12110 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL6A2P12110 RN7SKP130-201ENST00000364924 301 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 RNU6-83P-201ENST00000384568 112 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.46□□□□□ -1.38
COL6A2P12110 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
COL6A2P12110 OR7E156P-201ENST00000400303 464 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms