Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RPL7AP52-201ENST00000458096 790 ntBASIC3.29□□□□□ -1.88
APOBP04114 AC093720.1-201ENST00000505681 714 ntBASIC3.29□□□□□ -1.88
APOBP04114 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBP04114 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBP04114 AC140479.2-201ENST00000421567 3130 ntBASIC3.29□□□□□ -1.88
APOBP04114 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 AL132640.2-201ENST00000559968 1698 ntBASIC3.29□□□□□ -1.88
APOBP04114 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBP04114 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBP04114 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBP04114 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBP04114 RNA5SP251-201ENST00000410614 137 ntBASIC3.29□□□□□ -1.88
APOBP04114 RPL12P43-201ENST00000420608 499 ntBASIC3.29□□□□□ -1.88
APOBP04114 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
APOBP04114 HMGB1P23-201ENST00000518743 568 ntBASIC3.29□□□□□ -1.88
APOBP04114 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.29□□□□□ -1.88
APOBP04114 AL049779.3-201ENST00000557141 606 ntBASIC3.29□□□□□ -1.88
APOBP04114 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBP04114 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBP04114 AC021483.2-201ENST00000567415 758 ntBASIC3.29□□□□□ -1.88
APOBP04114 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 EEF1A1P33-201ENST00000554413 1362 ntBASIC3.29□□□□□ -1.88
APOBP04114 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
APOBP04114 AC022164.1-201ENST00000568767 2673 ntBASIC3.29□□□□□ -1.88
APOBP04114 MIR551A-201ENST00000385042 96 ntBASIC3.29□□□□□ -1.88
APOBP04114 AC007562.1-201ENST00000421819 517 ntBASIC3.29□□□□□ -1.88
APOBP04114 AL451062.2-201ENST00000427515 271 ntBASIC3.29□□□□□ -1.88
APOBP04114 AC023274.2-201ENST00000445264 521 ntBASIC3.29□□□□□ -1.88
APOBP04114 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBP04114 AC011487.3-201ENST00000593607 453 ntBASIC3.29□□□□□ -1.88
APOBP04114 RPL12P25-202ENST00000598100 674 ntBASIC3.29□□□□□ -1.88
APOBP04114 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBP04114 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBP04114 UBA3-213ENST00000631029 123 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBP04114 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOBP04114 LRRC37A16P-202ENST00000586022 3725 ntBASIC3.29□□□□□ -1.88
APOBP04114 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
APOBP04114 TENM2-207ENST00000520394 8034 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
APOBP04114 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 OLMALINC-203ENST00000641087 3779 ntBASIC3.28□□□□□ -1.88
APOBP04114 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
APOBP04114 FAM32BP-201ENST00000344033 333 ntBASIC3.28□□□□□ -1.88
APOBP04114 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.28□□□□□ -1.88
APOBP04114 AL359837.1-201ENST00000381357 287 ntBASIC3.28□□□□□ -1.88
APOBP04114 RNA5SP171-201ENST00000391071 115 ntBASIC3.28□□□□□ -1.88
APOBP04114 AC116036.1-201ENST00000412199 367 ntBASIC3.28□□□□□ -1.88
APOBP04114 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.28□□□□□ -1.88
APOBP04114 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBP04114 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBP04114 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC3.28□□□□□ -1.88
APOBP04114 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC3.28□□□□□ -1.88
APOBP04114 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC3.28□□□□□ -1.88
APOBP04114 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
APOBP04114 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC3.28□□□□□ -1.88
APOBP04114 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 AC025750.1-201ENST00000399891 379 ntBASIC3.28□□□□□ -1.88
APOBP04114 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.28□□□□□ -1.88
APOBP04114 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 AC093227.2-201ENST00000589357 285 ntBASIC3.28□□□□□ -1.88
APOBP04114 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.28□□□□□ -1.88
APOBP04114 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.28□□□□□ -1.88
APOBP04114 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
APOBP04114 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms