Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC122688.1-201ENST00000541494 223 ntBASIC5.29□□□□□ -1.56
MT-ND1P03886 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.29□□□□□ -1.56
MT-ND1P03886 AL359219.2-201ENST00000555184 348 ntBASIC5.29□□□□□ -1.56
MT-ND1P03886 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
MT-ND1P03886 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.29□□□□□ -1.56
MT-ND1P03886 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
MT-ND1P03886 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MT-ND1P03886 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.29□□□□□ -1.56
MT-ND1P03886 ARGFXP2-201ENST00000579304 949 ntBASIC5.29□□□□□ -1.56
MT-ND1P03886 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.29□□□□□ -1.56
MT-ND1P03886 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.29□□□□□ -1.56
MT-ND1P03886 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.29□□□□□ -1.56
MT-ND1P03886 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.29□□□□□ -1.56
MT-ND1P03886 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.29□□□□□ -1.56
MT-ND1P03886 AL136228.1-201ENST00000622221 319 ntBASIC5.29□□□□□ -1.56
MT-ND1P03886 AC111152.1-202ENST00000635848 339 ntBASIC5.29□□□□□ -1.56
MT-ND1P03886 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
MT-ND1P03886 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MT-ND1P03886 AC007842.1-201ENST00000597336 2039 ntBASIC5.29□□□□□ -1.56
MT-ND1P03886 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.29□□□□□ -1.56
MT-ND1P03886 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MT-ND1P03886 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
MT-ND1P03886 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.29□□□□□ -1.56
MT-ND1P03886 AC007342.5-201ENST00000571340 2142 ntBASIC5.29□□□□□ -1.56
MT-ND1P03886 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MT-ND1P03886 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.28□□□□□ -1.56
MT-ND1P03886 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
MT-ND1P03886 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 OR4F13P-202ENST00000560066 2054 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
MT-ND1P03886 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.28□□□□□ -1.56
MT-ND1P03886 AC112198.2-201ENST00000426589 6996 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MT-ND1P03886 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
MT-ND1P03886 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.28□□□□□ -1.56
MT-ND1P03886 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MT-ND1P03886 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.28□□□□□ -1.56
MT-ND1P03886 AL096711.1-201ENST00000404780 554 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 AL357752.1-201ENST00000412817 349 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.28□□□□□ -1.56
MT-ND1P03886 PTP4A1P1-201ENST00000420539 515 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 YY1P1-201ENST00000427625 668 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.28□□□□□ -1.56
MT-ND1P03886 AC019084.1-201ENST00000457337 432 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 SNORD125-201ENST00000459538 96 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 AC098847.1-201ENST00000473094 348 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 AC099521.1-201ENST00000482557 334 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.28□□□□□ -1.56
MT-ND1P03886 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.28□□□□□ -1.56
MT-ND1P03886 AC139365.2-201ENST00000517972 253 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.28□□□□□ -1.56
MT-ND1P03886 RPA2P1-201ENST00000556557 721 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 AC091078.2-201ENST00000557145 559 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 AC090236.2-201ENST00000587933 1101 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.28□□□□□ -1.56
MT-ND1P03886 AC124916.2-201ENST00000604416 224 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 AL139124.1-201ENST00000609123 421 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MT-ND1P03886 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MT-ND1P03886 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.28□□□□□ -1.56
MT-ND1P03886 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MT-ND1P03886 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
MT-ND1P03886 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.28□□□□□ -1.56
MT-ND1P03886 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
MT-ND1P03886 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
MT-ND1P03886 AL354854.1-201ENST00000455940 1363 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 AC079097.1-201ENST00000512187 1399 ntBASIC5.28□□□□□ -1.56
MT-ND1P03886 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
MT-ND1P03886 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.28□□□□□ -1.56
MT-ND1P03886 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
MT-ND1P03886 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
MT-ND1P03886 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
MT-ND1P03886 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.27□□□□□ -1.57
MT-ND1P03886 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
MT-ND1P03886 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
MT-ND1P03886 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
MT-ND1P03886 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MT-ND1P03886 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MT-ND1P03886 AL450345.1-202ENST00000605741 3881 ntBASIC5.27□□□□□ -1.57
MT-ND1P03886 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MT-ND1P03886 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MT-ND1P03886 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.27□□□□□ -1.57
MT-ND1P03886 RNU6-1331P-201ENST00000363658 106 ntBASIC5.27□□□□□ -1.57
MT-ND1P03886 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MT-ND1P03886 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MT-ND1P03886 MIR130B-202ENST00000385018 82 ntBASIC5.27□□□□□ -1.57
MT-ND1P03886 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
MT-ND1P03886 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.27□□□□□ -1.57
MT-ND1P03886 RN7SKP29-201ENST00000410957 272 ntBASIC5.27□□□□□ -1.57
MT-ND1P03886 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MT-ND1P03886 AL354890.1-201ENST00000413730 346 ntBASIC5.27□□□□□ -1.57
MT-ND1P03886 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.27□□□□□ -1.57
MT-ND1P03886 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.27□□□□□ -1.57
MT-ND1P03886 AC096644.3-201ENST00000416788 338 ntBASIC5.27□□□□□ -1.57
MT-ND1P03886 AC019205.1-201ENST00000421830 730 ntBASIC5.27□□□□□ -1.57
MT-ND1P03886 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.27□□□□□ -1.57
MT-ND1P03886 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.27□□□□□ -1.57
MT-ND1P03886 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.27□□□□□ -1.57
MT-ND1P03886 RAB9AP5-201ENST00000437794 597 ntBASIC5.27□□□□□ -1.57
MT-ND1P03886 RAB9AP2-201ENST00000443911 597 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms